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Python module for creating GDSII stream files, usually CAD layouts.

License: Boost Software License 1.0

Python 76.42% C++ 23.31% Batchfile 0.11% Shell 0.16%
python gdsii microfabrication cad

gdspy's People

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gdspy's Issues

write_gds(outfile,cells) can't export the CellReference in the cells

I use conder python 3.6 and gdspy 1.3.1, I found if I set cells=[topcell], write_gds can't export the CellReference in the topcell, I must set cells=None, but the other cell will be exported too.

so I update the gdspy init code as below, for your reference.
I add one more function.
def CellList(cell,celllist=[],First=True):
if isinstance(cell,Cell):
if First==True:
celllist.append(cell)

    for r in cell.elements:
        if isinstance(r,CellReference):
            celllist.append(r.ref_cell)
            CellList(r.ref_cell,celllist=celllist,First=False)
    return celllist
else:
    return None

and also, I update def wirte_gds() as below:
def write_gds(outfile,
cells=None,
name='library',
unit=1.0e-6,
precision=1.0e-9):
current_library.name = name
current_library.unit = unit
current_library.precision = precision

current_library.write_gds(outfile, cells)

totalcell=[]
if isinstance(cells,Cell):
    totalcell=cellList(cells,celllist=[])
    current_library.write_gds(outfile, totalcell)
elif isinstance(cells,list):
    for cell in cells:
        totalcell=totalcell+cellList(cell,celllist=[])
    totalcell=set(totalcell)
    current_library.write_gds(outfile, totalcell)

and then, if my code is gdspy.write_gds('a.gds',topcell), all the cellreference in the topcell can be exported successfully.

Gdspy 1.1 installation on windows

Following up on release 1.1 on Windows 7, python 3.5 64bit:

  1. Installer (gdspy-1.1.win-amd64-py3.5.exe) doesn't work for me, error: Python 3.5-32 is required for this package.

  2. When using pip I get the following error:
    line 26, in with open('README.md') as fin: FileNotFoundError: [Errno 2] No such file or directory: 'README.md'

Using Setuptools v34 and ez-setup 0.9.

Note that Installing gdspy1.0 works flawlessly with pip on this setup.

Thanks for the new version, really appreciate your work!

Descriptor improvements / installation instructions

I would like to propose some improvements to the description of Gdspy and clarifications to the installation instructions.

GDSPY README

Gdspy is a Python module for creating/importing/merging of GDSII stream files. It includes key libraries for creating complex CAD layouts:

  • Boolean operations on polygons (AND, OR, NOT, XOR) based on clipping algorithm
  • Polygon offset (inward and outward rescaling of polygons)
  • Efficient point-in-polygon solutions for large array sets

Gdspy also includes a simple layout viewer. Typical applications of Gdspy are in the fields of electronic chip design, planar lightwave circuit design, and mechanical engineering.

Installation

Dependencies:

  • Python (tested with versions 2.7 and 3.5)
  • Numpy (tested with 1.11.1)
  • C compiler (needed only if built from source)

LINUX / OS X

Option 1: Download Gdspy and build from source using the following command:

python setup.py install

Option 2: Install Gdspy with pip:

pip install gdspy

WINDOWS

Option 1: The preferred option is to install Gdspy using pre-compiled binaries that can be downloaded here for 32-bit or 64-bit systems. First, download a portable WinPython (tested with WinPython-64bit-3.5.2.2), run the executable to unpack the files to a directory. In the directory, run "WinPython Control Panel.exe" and click "Add packages". Select the downloaded Gdspy binary executable and click on "Install packages".

Option 2: Gdspy can also be built from source using a development environment to compile the boolean extension module using python setup.py install command.

Unable to install gdspy v1.0 on Windows

Having some issues installing gdspy v1.0 on Windows, my version is Python 3.5.2 :: Anaconda 4.0.0 (64-bit).
Tried pip install, and got a " Failed building wheel for gdspy" error.
Tried the pre-compiled binaries install option using gdspy-1.0.win-amd64-py3.5.exe, and get "Python version 3.5 -32 required, which was not found in the registry" error. Made sure I did execute the 64-bit version.

GDS Timestamps

The present implementation seems to use current date and time for GDS cell and library timestamps. As a result, GDS files created from the same layout at different points in time will have different binary headers. While appropriate in most situations, this behaviour complicates some use cases that involve binary comparison of GDS files (e.g. regression testing).

I would like to propose to add an optional timestamp=None argument to Cell.to_gds(), GdsLibrary.write_gds(), and GdsWriter() constructor. If set to None (the default), the functions would use the current date and time, otherwise the user-supplied timestamp would be used.

Behaviour of PolygonSet.fillet on non-trivial polygon

I created a new PolygonSet by applying
shape=gdspy.fast_boolean(Rectangle, Circle, 'not')
where Rectangle and Circle are partially overlapping. After that I merged all resulting polygons via merged=gdspy.fast_boolean(shape, None, 'or')
and applied the fillet method
merged.fillet(20, 100).
In the resulting shape, corners along the overlap path of the original shapes are not rounded accordingly or an erroneous shape is being generated.

Why do polygons have dtype('O') rather than something numeric?

When using gds_read, I found that the polygons are represented as numpy.ndarray of dtype('O'), i.e. object, not, say float or 'float64'.

For feeding the polygons to programs downstream, sometimes this matters, sometimes not. For example matplotlib and FreeCAD recognize the coordinates as numbers but PyGmsh doesn't.

To demonstrate, take any gds, say tutorial.gds from here, and

gds = GdsLibrary()
gds.read_gds(argv[1])

for layer, v in gds.top_level()[0].get_polygons(True).iteritems():
    print(layer, map(lambda p: (p.shape, p.dtype), v))

The workaround is trivial of course, just p.astype(float) (as in Polygon.fillet) or np.asarray(p, dtype=float) if a function is preferred to a method, but I was curious as to why the coordinates weren't numeric in the first place.

Validity of bounding box after cell deep copy

gdspy.Cell.copy() provides the ability to create a deep copy of a cell. It was noticed that when this is done for nested cells, any CellReferences within the cell have a their _bb_valid flags set to True. Hence, if you perform a deep copy of a cell, and then try to get its bounding box using get_bounding_box(), the algorithm fails, generating a KeyError at the return statement of gdspy.Cell.get_bounding_box() method.

I do not know all the implications of this, but at the very least, I believe the _bb_valid flags for the dependencies have to be explicitly set to False within cell.copy() to allow recalculation of the bounding boxes:

for ref in new_cell.get_dependencies(True):
            if ref._bb_valid:
                print('Reference ' + str(ref) + ' bb_valid flag is True, set to False')
                ref._bb_valid = False

Layer patterning does not work on Mac

screen shot 2018-05-20 at 2 05 43 pm

As shown in the attached figure, the layer patterning doesn't work on macOS Sierra. I have tried to solve this issue myself, but was unable to do so. This becomes extreme tedious for large circuits.

Adding all elements to an array

Good day

I want to add every element in a GDS file to an array. Currently I am doing this:

file1 = gdspy.GdsImport('Dcsfq.gds')
cell = file1.extract(file1.top_level()[0])

//Found this at another issue topic
references = []
for element in cell.elements:
if isinstance(element, gdspy.CellReference):
print 'Cell ' + element.ref_cell.name + ' referenced at ' + str(element.origin)
references.append((element.ref_cell, element.origin))
elif isinstance(element, gdspy.CellArray):
print 'Array of cells ' + element.ref_cell.name + ' referenced at ' + str(element.origin)
references.append((element.ref_cell, element.origin))

This gives me the list of all the element references as it should, but I need to know the locations of the polys and other basic elements as well. I think the problem lies with the fact that I am only getting the top layer. Is there a way to loop through the file to obtain the location and type (polys, slices etc) and put it all on an array.

For instance if I basically want to replicate an entire gds file (I know I use simpler methods, this is just for explaining purposes) and i want to find the location of each element in the file and make a new cell containing all the elements and their original locations.

The reason I want to do this, is because I have multiple files that I want to merge, but they contain elements with the same names so i cant just use

ref_cell.add(gdspy.CellReference(cell2, (150,0)))
ref_cell.add(gdspy.CellReference(cell1,(0,0)))
ref_cell.add(gdspy.CellReference(cell3, (225,-150), rotation=90))

as then I get double naming. So if there is an easier way then I am proposing, I am open to try anything. Also let me know if I should post any of my files or more information.

Sorry for the long post and thanks for any feedback.

tkinter dependency

If tkinter is not present on the system then LayoutViewer fails to import at all:

 >>> import gdspy
 >>> gdspy.LayoutViewer()
 Traceback (most recent call last):
    File "<stdin>", line 1, in <module>
    AttributeError: 'module' object has no attribute 'LayoutViewer'

Just thought I would let you know that it fails without indicating that a dependency is missing.

Binary comparison and SHA-1 hashing

@heitzmann As we go between gdspy versions and our own software versions, we validate each transition by regenerating all .gds file masks and comparing if their content has changed compared to when they were originally created. This allows us to detect any software/packages bugs. In order to achieve this, .gds files are hashed using SHA-1 and then the hashes are compared. However, we have encountered the following challenge: .gds files appear to be always different even if they are generated by the same code. The difference was traced to the timestamp that is embedded by gdspy when .gds files are written. Our attempts to exclude timestamps within the binary files, and compare the rest of binary content, runs into difficulties because of structural differences of various files. Could you please advise on how best to tackle this issue?

Python v3.5

FYI, I've started developing with this on Python 3.5 and I haven't had any trouble so far.

Had to get VS14 for pip to install (I'm on Win10), but it was fine after that. Probably could generate a wheel for it though, if you wanted?

I add class Ellipse in gdspy, it is very useful

Hi, based on class Round(), I add class Ellipse(), it is very usefule for me.
class Ellipse(PolygonSet):

__slots__ = 'layers', 'datatypes', 'polygons'

def __init__(self,
             center,
             radius_x,
             radius_y,
             inner_radius_x=0,
             inner_radius_y=0,
             initial_angle=0,
             final_angle=0,
             number_of_points=100,
             max_points=199,
             layer=0,
             datatype=0):
    radius=max(radius_x,radius_y)
    if isinstance(number_of_points, float):
        if inner_radius_x <= 0 and inner_radius_y<=0:
            if final_angle == initial_angle:
                number_of_points = int(
                    2 * radius * numpy.pi / number_of_points + 0.5)
            else:
                number_of_points = int(
                    abs(final_angle - initial_angle) * radius /
                    number_of_points + 0.5) + 2
        else:
            if final_angle == initial_angle:
                number_of_points = 2 * int(
                    2 * radius * numpy.pi / number_of_points + 0.5) + 2
            else:
                number_of_points = 2 * int(
                    abs(final_angle - initial_angle) * radius /
                    number_of_points + 0.5) + 2
    number_of_points = max(number_of_points, 3)
    pieces = int(numpy.ceil(number_of_points / float(max_points)))
    number_of_points = number_of_points // pieces
    self.layers = [layer] * pieces
    self.datatypes = [datatype] * pieces
    self.polygons = [
        numpy.zeros((number_of_points, 2)) for _ in range(pieces)
    ]
    if final_angle == initial_angle and pieces > 1:
        final_angle += 2 * numpy.pi
    angles = numpy.linspace(initial_angle, final_angle, pieces + 1)
    for ii in range(pieces):
        if angles[ii + 1] == angles[ii]:
            if inner_radius_x <= 0 and inner_radius_y<=0:
                angle = numpy.arange(
                    number_of_points) * 2.0 * numpy.pi / number_of_points
                self.polygons[ii][:, 0] = numpy.cos(angle)*radius_x
                self.polygons[ii][:, 1] = numpy.sin(angle)*radius_y
                self.polygons[ii] = (
                    self.polygons[ii] + numpy.array(center))
            else:
                n2 = number_of_points // 2
                n1 = number_of_points - n2
                angle = numpy.arange(n1) * 2.0 * numpy.pi / (n1 - 1.0)
                self.polygons[ii][:n1, 0] = (
                    numpy.cos(angle) * radius_x + center[0])
                self.polygons[ii][:n1, 1] = (
                    numpy.sin(angle) * radius_y + center[1])
                angle = numpy.arange(n2) * -2.0 * numpy.pi / (n2 - 1.0)
                self.polygons[ii][n1:, 0] = (
                    numpy.cos(angle) * inner_radius_x + center[0])
                self.polygons[ii][n1:, 1] = (
                    numpy.sin(angle) * inner_radius_y + center[1])
        else:
            if inner_radius_x <= 0 and inner_radius_y<=0:
                angle = numpy.linspace(angles[ii], angles[ii + 1],
                                       number_of_points - 1)
                self.polygons[ii][1:, 0] = numpy.cos(angle)* radius_x
                self.polygons[ii][1:, 1] = numpy.sin(angle)* radius_y
                self.polygons[ii] = (
                    self.polygons[ii]  + numpy.array(center))
            else:
                n2 = number_of_points // 2
                n1 = number_of_points - n2
                angle = numpy.linspace(angles[ii], angles[ii + 1], n1)
                self.polygons[ii][:n1, 0] = (
                    numpy.cos(angle) * radius_x + center[0])
                self.polygons[ii][:n1, 1] = (
                    numpy.sin(angle) * radius_y + center[1])
                angle = numpy.linspace(angles[ii + 1], angles[ii], n2)
                self.polygons[ii][n1:, 0] = (
                    numpy.cos(angle) * inner_radius_x + center[0])
                self.polygons[ii][n1:, 1] = (
                    numpy.sin(angle) * inner_radius_y + center[1])

def __str__(self):
    return ("Round ({} polygons, {} vertices, layers {}, datatypes "
            "{})").format(
                len(self.polygons), sum([len(p) for p in self.polygons]),
                list(set(self.layers)), list(set(self.datatypes)))

Rectangle fillet precision being ignored

Value entered for precision doesn't seem to affect the result in any way. Expected result would be all points being on a grid of size precision but that doesn't seem to be the case.

Problem in copy and relocate the object after rotation.

theta_small
thetha_large_100

@heitzmann

I am trying to make rectangular shape array structure (all rectangular shape are same size), whose rotation angle is decided by formula. I am directly calculating the rotate value using a formula in radian. When the rotation angle is small, everything is ok, rectangular shaped fixed at particular location, but if theta values is large, it is making mistake to fixed the location of rectangular shape, more precisely the coordinate of each rectangular location changes with large theta values. I do not understand the reason, I am quite new in Python. Attaching both files for reference. I am not sure that it's my programming mistake or related to this package.
I will be happy if you could answer. personal mail Id [email protected]

`

coding: utf-8

In[1]:

import numpy
import gdspy
import math
print('Using gdspy module version ' + gdspy.version)

------------------------------------------------------------------

POLYGONS

------------------------------------------------------------------

First we need a cell to add the polygons to.

poly_cell = gdspy.Cell('POLYGONS')

Polygon points for blue. (220 by 22 nm with periodicity = 250 nm).

points = [(0.015, 0.136), (0.114, 0.136), (0.114, 0.235), (0.136, 0.235), (0.136, 0.136), (0.235, 0.136), (0.235, 0.114),(0.136, 0.114), (0.136, 0.015), (0.114, 0.015), (0.114, 0.114), (0.015, 0.114)]

Create the polygon on layer 1.

trans_cell = gdspy.Cell('TRANS')

oper_cell = gdspy.Cell('OPERATIONS')

poly1 = gdspy.Polygon(points, 2) # add first polygon to layer 1

poly1 = gdspy.Polygon(points, 2).rotate(numpy.pi) # Rotate by 45 degree (numpy.pi/4)

nm=1e-9;
um=1e-6;

#rect_1 = gdspy.Rectangle( (0.0, 0.0), (250nm, 95nm), 1 ).rotate(3.14/6) # Define horigontal rectangle

ncells = 5
P = 325nm
Lambda = 532
nm
c = 3e8
f = 50*um
#A = 10

for iind in xrange (-ncells, ncells):
for jind in xrange(-ncells, ncells):
#print( jind)
rel_x1 = iindP # New location of the next polygons.
rel_y1 = jind
P
print(rel_x1,rel_y1)
temp = (rel_x12) + (rel_y12)
print(temp)
temp1 = ((rel_x12) + (rel_y12) + (f2))(0.5)
print(temp1)
Theta = 100numpy.pi(f-temp1)/Lambda # When 100 times, the location of rect changes.
print(Theta)
rect_1 = gdspy.Rectangle( (0.0, 0.0), (250nm, 95nm), 1 ).rotate(Theta)
poly1 = gdspy.copy(rect_1, rel_x1,rel_y1) # Copy the first polygons into new location rel_x and rel_y.
trans_cell.add(poly1) # Adding them in layer. If you dont add them nothing will appear.

Same goes for Labels & Text

#text1 = gdspy.Text('BLUE 220 X 22 ' , 6, (15, -10), horizontal=True, angle=0, layer=1) # Horizontal is false meaning vertical text.

#trans_cell.add(text1)

Addisional label can be created from here.

#label1 = gdspy.Label('BLUE 220 X 22 ',(15, -15), 'nw', layer=1)
#trans_cell.add(label1)

------------------------------------------------------------------

OUTPUT

------------------------------------------------------------------

Output the layout to a GDSII file (default to all created cells).

Set the units we used to micrometers and the precision to nanometers.

gdspy.write_gds('lens.gds', unit=1.0, precision=1.0e-12)

------------------------------------------------------------------

IMPORT

------------------------------------------------------------------

------------------------------------------------------------------

VIEWER

------------------------------------------------------------------

View the layout using a GUI. Full description of the controls can

be found in the online help at http://gdspy.sourceforge.net/

gdspy.LayoutViewer()

In[ ]:

`

Gdspy 1.1 write_gds() for hierarchical files

@heitzmann I have installed the latest release (Patch 1.1.1) on Mac OSX, and am observing a different behaviour for the GDSII writing functionality compared to previous releases.

In the past (release 1.0), gds_print() would accept a list of cells to be included in the output file, and then append any cell dependencies to the list of cells to be written. Here's the relevant code:

if cells == None:
        cells = iter(Cell.cell_dict.values())
    else:
        cells = [Cell.cell_dict.get(c, c) for c in cells]
        i = 0
        while i < len(cells):
            for cell in cells[i].get_dependencies():
                if cell not in cells:
                    cells.append(cell)
            i += 1
        ...
        for cell in cells:
             outfile.write(cell.to_gds(unit / precision))

This worked flawlessly for deeply hierarchical cell structures.

The implementation of this functionality in 1.1.1 (write_gds() function), however, does not explicitly add the dependencies:

if cells is None:
        cells = self.cell_dict.values()
    else:
        cells = [self.cell_dict.get(c, c) for c in cells]
        for cell in cells:
             outfile.write(cell.to_gds(unit / precision))

resulting in an empty GDSII file. If I add the while / for block (the part in bold above), the dependencies are indeed added, and the resulting file contains all intended hierarchy.

Should the dependencies be explicitly added here, as before? Or am I missing something in the new implementation of GdsLibrary?

Boolean subtraction errors

@heitzmann I am observing errors in the boolean subtraction algorithm in the latest gdspy 1.1.1.

Errors seem to occur with any structures that contain holes. An example below creates two polygon sets, in a shape of the digits 8 and 6. It then subtracts two identical cells. gdspy 1.0 produces an empty result, as expected. On the other hand, the boolean not algorithm in gdspy 1.1.1 generates incorrect triangular structures.

import gdspy

coords8 = [[[-1.16635, -0.5    ], [-1.16635,  0.5    ], [-0.99945,  0.5    ], [-0.99945, -0.5    ]],
           [[-0.99945,  0.3331 ], [-0.99945,  0.5    ], [-0.50005,  0.5    ], [-0.50005, -0.5    ],
            [-0.99945, -0.5    ], [-0.99945, -0.3331 ], [-0.66695, -0.3331 ], [-0.66695, -0.08345],
            [-0.99945, -0.08345], [-0.99945,  0.08345], [-0.66695,  0.08345], [-0.66695,  0.3331 ]]]
coords6 = [[[ 0.50005, -0.5    ], [ 0.50005,  0.5    ], [ 1.16635,  0.5    ], [ 1.16635,  0.3331 ], [ 0.66695,  0.3331 ], [ 0.66695, -0.5    ]],
           [[ 0.66695, -0.5    ], [ 1.16635, -0.5    ], [ 1.16635,  0.08345], [ 0.66695,  0.08345], [ 0.66695, -0.08345], [ 0.99945, -0.08345], [ 0.99945, -0.3331 ], [ 0.66695, -0.3331 ]]]
poly8_layer1 = gdspy.PolygonSet(coords8, 1)
poly6_layer1 = gdspy.PolygonSet(coords6, 1)
poly8_layer2 = gdspy.PolygonSet(coords8, 2)
poly6_layer2 = gdspy.PolygonSet(coords6, 2)

cell1 = gdspy.Cell('CELL1')
cell2 = gdspy.Cell('CELL2')
cell1.add(poly8_layer1)
cell1.add(poly6_layer1)
cell2.add(poly8_layer2)
cell2.add(poly6_layer2)
cell_ref1 = gdspy.CellReference(cell1)
cell_ref2 = gdspy.CellReference(cell2)

result = gdspy.fast_boolean(cell_ref1, cell_ref2, 'not')
result_cell = gdspy.Cell('DIFF_CELL')
result_cell.add(result)
gdspy.write_gds('boolean_subtract_test_example.gds', cells=[cell1, cell2, result_cell])   # for gdspy 1.1.1
gdspy.print_gds('boolean_subtract_test_example.gds', cells=[result_cell])               # for gdspy 1.0

Problem importing in Anaconda on Ubuntu, python 3.6

I've tried:

pip install gdspy

and also

git clone github:gdspy.git

followed by

pip install -e gdspy

The install goes fine, but the importing fails every time with the following message:

gdspy/clipper.cpython-36m-x86_64-linux-gnu.so: undefined symbol: _ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE9_M_createERmm

This works fine under Anaconda on OS X with python 3.6.

I tried installing the pyclipper package from PyPI and it works fine (it is also a python wrapper for the C++ clipper library).

Saving only 1 cell + references to file

Hay there

I currently have 3 GDSII files that I am combining into one layout. I have managed to get all 3 cells into one cell and transposed and rotated them as necessary. Now I would only like to save one the one cell I have to a new GDS file.

import gdspy

file1 = gdspy.GdsImport('Dcsfq.gds')
file2 = gdspy.GdsImport('Conf2.gds')
file3 = gdspy.GdsImport('Tff4b.gds')

cell1 = file1.extract(file1.top_level()[0])
cell2 = file2.extract(file2.top_level()[0])
cell3 = file3.extract(file3.top_level()[0])

ref_cell = gdspy.Cell('TRANSLATED')
ref_cell.add(gdspy.CellReference(cell2, (150,0)))
ref_cell.add(gdspy.CellReference(cell1, (0,0)))
ref_cell.add(gdspy.CellReference(cell3, (225,-150), rotation=90))

newgds = gdspy.GdsPrint('new_gds.gds', unit=1.0e-6, precision=1.0e-9)
newgds.write_cell(ref_call)
newgds.close()

This however gives me an empty GDSII file. Am I doing the translations/rotation wrong, or is it the way I save the file that is not done properly? If someone could assist me with this I would be very greatful

Thanks

Adding metadata to gds or cells / Saving cell-libraries in hard-drive for future use

Hi Lucas,

Two questions:

  1. Is there a way to add metadata to cells or gds? Metadata such as 'name', 'creator', 'version' ...
  2. I have a bunch of common external .gds from manufacturers that i need to import for every .gds i draw. Is there a way to import just once, then save them in a file in hard-drive, and simply just import that saved file in every one of my gdspy scripts (avoid importing the external gds one-by-one everytime I write a new gdspy script)?

Thanks,
Lawrence Tzuang

how to write all CellReference in the topcell into the gds?

@heitzmann Hi, I use write_gds function, but all CellReference in the topcell are missing in the gds file.
Now, I use two method to solve this issue.
1: gdspy.wirte_gds('.gds',cells=None), this method, other topcell are wirted into the gds file too.
2: gdspy.write_gds('
.gds',list(topcell.get_dependencies(True))+[topcell]), this method seems to work very well.
Do you have any other better suggestion?
thanks very much!

polygon in clockwise or counterclockwise

Hi

maybe not totally related to gdspy, but I just wonder if there is a common convention regarding the polygon vertices orientation in GDS file. The file I am opening has counter-clockwise but I read somewhere that GDS format does not dictate one way or the other. Is this true? How to express holes in a polygon then?

Thanks
enuinc

Compiling to exe with gdspy import

Good day.

I seem to be spamming the forums a bit. Sorry for that. I am currently trying to compile my .py script to an exe. The script containt gdspy of course. I can't seem to find a way to do this properly and keep getting the following error when using pyinstaller (pyinstaller doesn't officially support gdspy, I believe).

untitled

Has anyone tried to compile gdspy dependent files? Please let me know if I need to provide any other details. My code is listed below and I have confirmed that pyinstaller is working and I have compile just a small "print("hallo world")" script and it worked 100%

import gdspy

print('Please enter file name:')
filename = raw_input()+ str('.gds')

file1 = gdspy.GdsImport('Dcsfq.gds')
file2 = gdspy.GdsImport('Conf2.gds')
file3 = gdspy.GdsImport('Tff4b.gds')

cell1 = file1.extract(file1.top_level()[0])
cell2 = file2.extract(file2.top_level()[0])
cell3 = file3.extract(file3.top_level()[0])

ref_cell = gdspy.Cell('TRANSLATED')

ref_cell.add(gdspy.CellReference(cell2, (150,0)))
ref_cell.add(gdspy.CellReference(cell1,(0,0)))
ref_cell.add(gdspy.CellReference(cell3, (225,-150), rotation=90))

gdspy.gds_print(filename, cells=[ref_cell], unit=1.0e-6, precision=1.0e-9)

gdspy.LayoutViewer(cells = ref_cell)

Any help will be greatly appreciated.
Thanks

Output Error while generating large number of fine slices

I need to make fine slices of the polygons for my application and I wrote a script for the same. While the script itself doesn't throw any error, I see that polygons generated after slice operation are shifted from the original in a specific pattern. Here is original polygons superimposed.

image

The slices are aligned with the original in the left and right edges, but shifted down in the middle of the polygon. The deviation is more prominent when the slice is finer.
Here is the same output zoomed in with original polygon highlighted in white.

image

And here is one of the slices highlighted in white.

image

This is the code that generates this result.
`#!/usr/bin/python
import numpy
import gdspy

def frange(start, stop, step):
i = start
while i < stop:
yield i
i += step

poly_cell = gdspy.Cell('POLYGONS')
points = [(10.43631016, -35.44995495), (20.43478711, -35.27543088), (20.41733471, -34.27558319), (10.41885775, -34.45010725)]

polylist = []

poly2 = gdspy.Polygon(points, 0)
poly_cell.add(poly2)
polylist.append(poly2)

bbox = poly_cell.get_bounding_box()
print (bbox)
sl = []

for i in frange(bbox[0][0]+0.005, bbox[1][0]+0.005, .01):
sl.append(i)

result = gdspy.slice(polylist, (sl), 0)
poly_cell.add(result)
gdspy.LayoutViewer()
`

Problem with 'boolext'

Hi!

I'm a new user of gdspy and I have some issues with the latest version. I'm using Anaconda with Python 3.5 and every time I try to run my script I have this error prompting :

File "C:\Users\Mathieu\Documents\Python\gdspy-1.0\gdspy__init__.py", line 44, in from gdspy import boolext

ImportError: cannot import name 'boolext'

And I have no idea why. Do you ?

Offset method robustness for complex shapes

The offset method for shapes that "close" upon themselves (i.e. enlarged such that the resulting polygon structure has overlapping portions) results in segmentation fault (SIGSEGV).

As a simple example -- letter C, drawn as a single polygon, and then enlarged using the offset method:

import gdspy
import numpy

cell = gdspy.Cell('CELL')
c_coords = numpy.array([  [ 0.6663    ,  0.32629112],
                          [ 0.6663    ,  0.1669    ],
                          [ 0.4994    ,  0.        ],
                          [ 0.1669    ,  0.        ],
                          [ 0.        ,  0.1669    ],
                          [ 0.        ,  0.8331    ],
                          [ 0.1669    ,  1.        ],
                          [ 0.4994    ,  1.        ],
                          [ 0.6663    ,  0.8331    ],
                          [ 0.6663    ,  0.67370888],
                          [ 0.4994    ,  0.67370888],
                          [ 0.4994    ,  0.76396776],
                          [ 0.43026776,  0.8331    ],
                          [ 0.23603224,  0.8331    ],
                          [ 0.1669    ,  0.76396776],
                          [ 0.1669    ,  0.23603224],
                          [ 0.23603224,  0.1669    ],
                          [ 0.43026776,  0.1669    ],
                          [ 0.4994    ,  0.23603224],
                          [ 0.4994    ,  0.32629112]])
poly = gdspy.Polygon(c_coords)
cell.add(poly)
offset_result = gdspy.offset(gdspy.CellReference(cell), distance=0.1)
offset_cell = gdspy.Cell('CELL_OFFSET')
offset_cell.add(offset_result)

gdspy.LayoutViewer(cells=[offset_cell])

For distance=0.1 (as above), the offset method returns the expected result. The moment the C-shape "closes" upon itself (distance >= 0.18), the call returns SIGSEGV.

Could you please suggest what can be done to avoid this? One workaround would be to break the shape into multiple polygons, but it is not a generic solution. Thank you.

Exporting to gds by layer

Hello Lucas,

I am looking for a way to export to gds specific layers from a larger gds file. Alternatively, is there a way to import only a particular layer using gds_import?

Shreyas Shah

Wrong results from fast_boolean()

Using production layouts, we have observed wrong results using fast_boolean() using the "and" operation with gdspy 0.9. The error seems to be related to fracturing in such way that if the clipper results are to be fractured, the results may be wrong.

Is it possible that clipper results violate some condition implicit to gdspy?

Unfortunately, I cannot provide a test case by now. If I can spare some time in the coming weeks, I'll try to find a simple example useful for hunting down the bug.

coordinate precision

Hi,

I have another question about the polygon coordinate precision extracted from GDS.

I am using the following code to get all polygons from a GDS file.

import gdspy
gdsii = gdspy.GdsLibrary()
gdsii.read_gds('out-file.gds')
main_cell = gdsii.top_level()[0]
pol_dict = main_cell.get_polygons(by_spec=True)
polygons = pol_dict[(41, 0)]

When I print out the values in polygons, I saw the following

[array([[2.16, 1.82],
[2.16, 0.98],
[1.82, 0.98],
[1.82, 0.54],
[2.26, 0.54],
[2.26, 0.76],
[2.34, 0.76],
[2.34, 1.82]]),
....

It seems I have to multiply 1000 to get the integer coordinates. Is this as expected?

I don't mind to multiply 1000 but I thought all numbers in GDS file is integer

Also, if I want to draw some polygons to output them to a GDS file, should I divide my coordinates by 1000?

Thanks
enuinc

distinguish relative vs absolute transform

gdspy doesn't seem to distinguish between relative vs absolute transform for AREF/SREF records. For example, CellReference.to_gds() contains the following lines:

    if self.x_reflection:
        word += 0x8000
    if not (self.magnification is None):
        word += 0x0004
        values += struct.pack('>2h', 12, 0x1B05) \
            + _eight_byte_real(self.magnification)
    if not (self.rotation is None):
        word += 0x0002
        values += struct.pack('>2h', 12, 0x1C05) \
            + _eight_byte_real(self.rotation)

0x0004 (absolute magnification) and 0x0002 (absolute rotation) flags in STRANS are always set when there's magnification or rotation.

Unfortunately, absolute mag/rot should be avoided in hierarchical designs with many nested levels, where absolute transforms quickly get out of control. In most cases, we should only use relative magnify/rotate in designs. This is done by clearing these two flags, while still appending the MAG and/or ANGLE records.

In short, gdspy should support and distinguish between absolute and relative transforms, with relative transform being the default.

The following page documents this matter with great details:
http://boolean.klaasholwerda.nl/interface/bnf/gdsformat.html#rec_strans

How to get lpp or layer datatype pair?

get_layers only output layers number
get_datatypes only output datatype number
The real useful info is the pair of layer and datatype, or lpp.
get_lpp() should be a valuable function

Error in transformation of label coordinates

In the definition of CellReference, polygons are (correctly) transformed according to

polygons[kk][ii] = polygons[kk][ii] * ct \
                                + polygons[kk][ii][:, ::-1] * st

(e.g. x<- cos(theta) x - sin(theta) y, but labels are transformed according to:

lbl.position = lbl.position * ct + lbl.position * st

(e.g. x<- cos(theta) x - sin(theta) x), which is not consistent or unitary. The label formula should be corrected to follow the same formula as the polygons.

lbl.position = lbl.position * ct + lbl.position[::-1] * st

This correction fixed the disagreement I was seeing with a layout viewed in klayout.

Path widths not conserved for number_of_paths higher than 1

I noticed that when I use a number_of_paths higher than 1 when I change the path distance between the paths this does not conserve the widths of the paths it draws. Only the widths of the paths at the beginning and the end of the tapered section. I would say that these two parameters could be simultaneously the width of the line and would strongly suggest this should be fixed, as for the effect can be difficult to observe but lead to errors none the less.

how to load a gds file, flatten it, and extract all polygons

Hi

Great software and appear to have all the things I need. However, I can not figure out how to load a gds file (not very big, about 2MB), flatten its hierarchy, and extract all polygons in a given layer.

I am sorry for such an elementary question.

Thanks
enuinc

call for Ellipse support

Hello. I am wondering if you could add Class: Ellipse support? Since Round is supported perfectly, I think this will not be a big problem. Thanks very much!

depth argument of Cell.get_labels() is confusing

I'm referring to the following code segment.

    def get_labels(self, depth=None):
        labels = libCopy.deepcopy(self.labels)
        if depth is None or depth >= 0:
            for element in self.elements:
                if isinstance(element, CellReference):
                    labels.extend(
                        element.get_labels(None if depth is None else depth -
                                           1))
                elif isinstance(element, CellArray):
                    labels.extend(
                        element.get_labels(None if depth is None else depth -
                                           1))
        return labels

Passing in depth=0, one gets labels from the top-level cell, plus labels from the first-level child elements.
In order to get labels from the top-level cell only, one has to pass in depth=-1.

This behavior was confusing to my colleagues. After reading the code, I think it's better to change one line:

        if depth is None or depth > 0:

LayoutViewer hangs when I try to close it.

Im using Conda ipython with python version 3.6.3 on MacOS 10.13 to run code which opens a LayoutViewer. The code successfully opens a viewer. However when I try to close the viewer, either by clicking the red button at the upper left of the window or by selecting python>"quit python", I get a spinning beachball. The ipython command prompt returns (is no longer blocked) despite the spinning beachball.

I have the same problem in my python 2.7 conda environment.

Additionally, if I ignore the spinning beachball and hanging LayoutViewer, and continue working in the ipython shell, then the next time I call a layout viewer, the one that was hanging finally closes and a new layout viewer window opens.

I have noticed that if I open ipython, specifying tk backend i.e. "ipython --pylab=tk", then the viewer window will eventually close after first python>"quit python", followed by two (2) clicks of thew red button. This works both in the 3.6.3 main env and the 2.7 env. I say eventually because it usually fails (i.e. beachball) on the first invocation of "ipython --pylab=tk", but then starts to the work on the second or third. The default backend is 'MacOSX'.

Adding a Cell directly within a Cell (without using a CellReference) causes "missing ENDSTR record" error when trying to open the GDS file that is written out

Calling Cell.add() works fine with the LayoutViewer, but when the layout is then written to a GDS file, trying to open it up in Clewin 5 causes a "missing ENDSTR record" error. Trying to open it up in KLayout also causes an error.

Suggested fix is that trying to add a Cell directly to another Cell just inserts a CellReference at position (0,0), or something similar. Or maybe just throw an error? I'm sure trying to get the file to write correctly would take more time than either of these other two options.

Polygon enlargement

@heitzmann : Our chip design workflow is based on gdspy 0.7 and is built on gdspy geometry objects and gdspy boolean operations. There is one feature, however, that requires us to use additional packages to complete the design cycle. In our mask layouts, it is critical to have the ability to introduce CD bias to account for the linewidth reduction during the fabrication process. In mathematical terms, one needs to have the ability to enlarge polygons by a predefined amount in the direction that is normal to the polygon surface... thus a request for this feature. Thank you.

Layer Isolation and cells Boolean operation

Hi
I wanted to export a single layer from the gds file but I couldn't find the way for it so I have added a method using the flatten method to do it for me, but here is the problem when the file is slightly big(10MB) and I want to use my hand made method It becomes very time consuming so I wanted to ask how could I do Boolean operation with two cells from each other?
I am sure that what I have done could become more efficient using the appropriate library function but I don't know how.

Copy cells layers

Having a cell with different layers and references, is it possible to copy/translate one o multiple layers?

I have a "main cell" which is a set of multiple cells and cell references. These contain different elements in seven different layers. I wonder if it's possible to make a copy/translation of the whole "main cell", with the same set of cells and references, but just containing one of the layers.

Nested Cells

Is it possible to nest cells using gdspy? I've poured over the documentation/examples but haven't found any explicit reference to nesting or cell hierarchy.

I'm building a library of function components that return cells. I would like more complex cells to call simpler cell routines. The GDS format obviously works really well with this recursive framework.

Using DEPLOF font

I'd like to add the DEPLOF font to gdspy.

4441325253959

It's a font used on other layout editors (e.g. LayoutEditor CleWin ), and is purpose-built for 2D layout/fab. I received permission from the creator of the MATLAB gdsii-toolbox (Ulf Griesmann) to adapt his implementation, and have it basically ready to go. My question is whether how I should write the commit--I was thinking of adding an additional argument font to the init argument of the Text class. So that instead of

def __init__(self, text, size, position=(0, 0), horizontal=True, angle=0, layer=0, datatype=0)

it would now be

def __init__(self, text, size, position=(0, 0), horizontal=True, angle=0, font = 'block', layer=0, datatype=0)

where font could be chosen to be either 'block' (the current font) or 'deplof' (the proposed font), so the change would be transparent and no one's layouts would be changed, but users would now have the option to select the DEPLOF font. (and perhaps down the road the default could be changed to DEPLOF)

Does sound reasonable?

How to properly write hierarchical Cells to GDS?

I'm currently having an issue with properly writing hierarchical Cells (with references to other cells that have their own geometric objects) with write_gds(). For example, see the minimum working example below:

import gdspy
top = gdspy.Cell("top")
top.add(gdspy.Rectangle((0,0), (15000, 15000), layer=10, datatype=0))

ex = gdspy.Cell("exclusion_region")
ex.add(gdspy.Rectangle((0, 13000), (15000, 15000), layer=7, datatype=0))
top.add(ex)

# gdspy.LayoutViewer()
gdspy.write_gds('test.gds', unit=1.0e-6, precision=1.0e-9)

with the following intended Cell hierarchy:

top (Cell)
   |_ Rectangle
   |_ ex (Cell)
         |_ Rectangle

In the above, the gdspy.LayoutViewer() shows the correct hierarchy of Cells and objects. However, the GDSII file it creates (test.gds), seems to be broken. When I try to open with Klayout, I get the error:
Invalid record or data type (position=194, record number=11, cell=top)

Any idea how I can properly write these Cells to GDS so it will show up correctly? Am I missing something pretty obvious?

Thanks!

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