flywheel-apps / dcm2niix Goto Github PK
View Code? Open in Web Editor NEWFlywheel Gear for the execution of dcm2niix
Flywheel Gear for the execution of dcm2niix
I was able to successfully convert a dicom series where dicom slices had different PixelSpacing
values. The raw dicom metadata values vary in precision from 5 to 10 decimal places. If you manually round each PixelSpacing
value per slice to 5 decimal places, all the values per slice are the same. I was wondering if this gear does that automatically as it converts to nrrd
format, or if such inconsistency does not present an issue during conversion. Just asking because I encounter several CT series with this issue and my current method for dicom to nrrd conversion fails in those particular cases.
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