flywheel-apps Goto Github PK

afni_base

a base docker image for afni

afni_preproc_meica

this gear runs a full afni preprocessing pipeline as well as multi echo ICA

afq-demo

ants_registrationsynquick

api_call_timer

times and plots api calls to sites

base-gear-anaconda

Base Gear that includes Anaconda Python environment

base-gear-ubuntu

Base Gear with Ubuntu environment

bids-app-template

A Template for Gears running on BIDS formatted data

bids-app-template-test

Test environment for bids-app-template

bids-bulk-editor

An analysis gear for assisting BIDS curation

bids-fmriprep

Gear that runs fMRIPrep on BIDS-curated data

bids-freesurfer

Gear that runs freesurfer on BIDS-curated data

bids-hcp

bids-mriqc

Gear that runs the MRIQc pipeline on BIDS-curated data

bids-pre-curate

The Flywheel BIDS pre-curation gear will help in the renaming of acquisitions and classification of data based on user-input on a bulk scale.

bids-qsiprep

bru2nii

Bruker2Nifti Gear

bruker2nifti

Bruker to NIfTI converter

bxh-xcede-tools-qa

QA using data processing and image analysis tools for data in BXH or XCEDE format.

c-pac

Configurable Pipeline for the Analysis of Connectomes (C-PAC)

cortex-demo

csv-import

Parse a CSV and place CSV info into Subject info using the Python SDK

curate-bids

THIS PROJECT HAS MOVED TO GITLAB: https://gitlab.com/flywheel-io/flywheel-apps/curate-bids

custom-curator

A gear that curates a project given a python file implementing a curation class

dataview2bigquery

Gear for exporting Flywheel Views to BigQuery

dcm2niix

Flywheel Gear for the execution of dcm2niix

debug-generatefile

Generates output file of a specific size

demo-placeholder

A placeholder gear for conserving disk space on field demos.

dicom-metadata-importer

Extracts DICOM header metadata. Works with Siemens, Philips, and GE DICOM data.

dicom-mr-classifier