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DT's Projects

metagenomic-analysis-workshop icon metagenomic-analysis-workshop

The National Center for Genome Analysis Support (NCGAS) offers a three-day workshop on High Performance Computing (HPC) usage and metagenomic analysis between October 7th to 9th, 2019.

metagenomics-workshop-spring-2020 icon metagenomics-workshop-spring-2020

NCGAS is hosting a metagenomics workshop, focusing on whole genome sequencing metagenome analysis between April 20th to 22nd at Indiana University, Bloominton.

microbiome_helper icon microbiome_helper

A repository of bioinformatic scripts, SOPs, and tutorials for analyzing microbiome data.

pcc icon pcc

Resources for Python Crash Course, from No Starch Press.

pcc_2e icon pcc_2e

Online resources for Python Crash Course (Second Edition), from No Starch Press

prog4comp icon prog4comp

Resources for the book "Programming for Computations" by S. Linge and H. P. Langtangen

progbio icon progbio

Teaching materials for classes teaching programming to biologists

python-graph-clustering icon python-graph-clustering

A collection of Python scripts that implement various graph clustering algorithms, specifically for identifying protein complexes from protein-protein interaction networks.

python-scraping icon python-scraping

Code samples from the book Web Scraping with Python http://shop.oreilly.com/product/0636920034391.do

pythonds icon pythonds

Data Structures package for Problem Solving with Algorithms and Data Structures using Python

r-intermediate icon r-intermediate

An intermediate level course on the R statistical programming language http://tinyurl.com/cruk-tidyr

rosalind icon rosalind

Solutions to Rosalind Bioinformatics Problems

scipro-primer icon scipro-primer

Software and additional material for the book "A Primer on Scientific Programming with Python"

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