dougollerenshaw / figrid Goto Github PK
View Code? Open in Web Editor NEWUtilities for formatting matplotlib figures
License: MIT License
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alleninstitutefigrid's Issues
White space around figure
Thanks for making this useful package! I have a problem, when I make a plot it doesn't fill the entire figure. I get a white border around it, especially on the left and top.
Code:
fig = plt.figure(figsize=(7, 9), dpi=DPI)
ax = {'panel_A': fg.place_axes_on_grid(fig, xspan=[0.1, 1], yspan=[0, 0.18]),
'panel_B': fg.place_axes_on_grid(fig, xspan=[0.1, 1], yspan=[0.25, 0.5],
dim=[1, n_columns + 1], wspace=0.3),
'panel_C': fg.place_axes_on_grid(fig, xspan=[0.1, 1], yspan=[0.55, 0.8],
dim=[1, n_columns + 1], wspace=0.3),
'panel_D': fg.place_axes_on_grid(fig, xspan=[0.2, 0.45], yspan=[0.85, 1]),
'panel_E': fg.place_axes_on_grid(fig, xspan=[0.55, 1], yspan=[0.85, 1])}
# Add subplot labels
labels = [{'label_text':'a', 'xpos':0, 'ypos':0, 'fontsize':10, 'weight': 'bold',
'ha': 'right', 'va': 'bottom'},
{'label_text':'b', 'xpos':0, 'ypos':0.2, 'fontsize':10, 'weight': 'bold',
'ha': 'right', 'va': 'bottom'},
{'label_text':'c', 'xpos':0, 'ypos':0.55, 'fontsize':10, 'weight': 'bold',
'ha': 'right', 'va': 'bottom'},
{'label_text':'d', 'xpos':0, 'ypos':0.85, 'fontsize':10, 'weight': 'bold',
'ha': 'right', 'va': 'bottom'},
{'label_text':'e', 'xpos':0.5, 'ypos':0.85, 'fontsize':10, 'weight': 'bold',
'ha': 'right', 'va': 'bottom'}]
fg.add_labels(fig, labels)
As you can see here (hopefully) the figure doesn't start at the top left:
`sharex=True` does not work on an `Nx1` array of axes
When running this block of code:
import figrid as fg
import matplotlib.pyplot as plt
fig = plt.figure(figsize=(15,7))
axes = {
'axis_array': fg.place_axes_on_grid(fig, xspan=[0, 1], dim=[3, 1], sharex=True)
}I get:
---------------------------------------------------------------------------
AttributeError Traceback (most recent call last)
Input In [X], in <cell line: 6>()
2 import matplotlib.pyplot as plt
4 fig = plt.figure(figsize=(15,7))
5 axes = {
----> 6 'axis_array': fg.place_axes_on_grid(fig, xspan=[0, 1], dim=[3, 1], sharex=True)
7 }
File ~/.conda/envs/XX/lib/python3.9/site-packages/figrid/__init__.py:67, in place_axes_on_grid(fig, dim, xspan, yspan, wspace, hspace, sharex, sharey, frameon)
65 inner_ax[row][col].xaxis.set_ticks_position('bottom')
66 elif row < dim[0] and sharex == True:
---> 67 plt.setp(inner_ax[row][col].get_xtick)
69 if col == 0 and sharey == True:
70 inner_ax[row][col].yaxis.set_ticks_position('left')
AttributeError: 'AxesSubplot' object has no attribute 'get_xtick'It looks like I need to deal with the case in which the inner_ax has only 1 col.
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