Comments (5)
deleted my comment that was incorrect.
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So the message is
System.IO.IOException: No space left on device : '/home/runner/runners/2.316.0/_diag/Worker_20240430-181019-utc.log'
No space is not an issue we can easily solve. Maybe large runners. Alternatively, this can also be run on private runners instead of on github runners...
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I had another look at the CPU build and that is due to a bug in the script
Run docker push --all-tags ***/fastsurfer:cpu-v.2.2.0
docker push --all-tags ***/fastsurfer:cpu-v.2.2.0
shell: /usr/bin/bash -e {0}
tag can't be used with --all-tags/-a
Error: Process completed with exit code 1.
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I just realized we are a bit lucky, because re-building these images would have changed the (versioned) static images for Fastsurfer. That means same version docker Images may have lead to different images based on when they were pulled...
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I stoped automated runs of this workflow in dev and stable for now. Once we decided how to do this in the future, we can delete those files.
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Related Issues (20)
- CC values all 0 in aseg+DKT.stats HOT 5
- input image contains negative values and gpu memory issue HOT 6
- Issue creating symbolic links when running fastsurfer-gpu.sif HOT 6
- Error during smooth_aparc.py mode HOT 1
- Error during smooth_aparc.py mode_filter HOT 5
- Biasfield-corrected image input of the segstats.py HOT 4
- Use of '--rm' argument in build.py results in a TypeError HOT 4
- Is it possible to get segstats of cerebellum after run FastSurfer pipeline? HOT 3
- Some zeros in aseg.stats HOT 8
- Fooocus colab stopping with this error HOT 4
- FastSurfer surf pipeline did not finish: Missing .label files (not enough memory for mris_sample_parc) HOT 11
- conform.py bug HOT 2
- srun_fastsurfer.sh on HPC, surface pipeline fails for hundreds but works for tens of subjects HOT 8
- Question about content of wmparc.DKTatlas.mapped.mgz HOT 1
- Support for lesion masks? HOT 1
- Unmatched ROIs in predicted segmentation and provided FastSurfer_ColorLUT.tsv HOT 23
- FastSurfer Segmentation Modules: disable conformation of input image to isometric spaces HOT 5
- FastSurfer QuickSeg doesn't work with OASIS `.img` files HOT 3
- Model download issue HOT 22
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