Comments (1)
There is an overview of the different files here:
https://github.com/Deep-MI/FastSurfer/blob/dev/doc/overview/OUTPUT_FILES.md
Generally, wmparc
is the white matter parcellation, while aparc
is the gray matter parcelleation. So they are not comparable.
Also, aparc.DKTatlas+aseg.deep.withCC.mgz
is the parcellation based on the segmentation from the segmentation pipeline, without the updates from the the FreeSurfer surface reconstruction. wmparc.DKTatlas.mapped.mgz
is after surface updates (mapped
), where the parcellation from the surface is mapped
to the image. So gray matter statistics between wmparc.DKTatlas.mapped.mgz
and aparc.DKTatlas+aseg.mapped.mgz
should not really differ.
from fastsurfer.
Related Issues (20)
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from fastsurfer.