deep-mi Goto Github PK

3d-neuro-seg

Repository to our 3d neuro-anatomic segmentation method submitted to the MIDL 2022 conference

brainprint

A python-only derivative of the original BrainPrint scripts

brainprint-legacy

Python scripts for shape analysis of neuroimaging data (wrapping around shapeDNA and FreeSurfer)

deep-mi.github.io

Deep Medical Imaging Lab Webpage

discus

The repository contains code for the Geometric Deep Learning for Diffusion MRI Signal Reconstruction with Continuous Samplings (DISCUS) project

fastsurfer

PyTorch implementation of FastSurferCNN

fastsurfer-webpage

Jekyll Webpage for the FastSurfer project

fatsegnet

Deep CNN for Abdominal Adipose Tissue Segmentation on Dixon MRI

fslmer

Univariate and mass-univariate linear mixed-effects analysis for FreeSurfer imaging data.

fsqc

A set of quality control scripts for FreeSurfer- and FastSurfer-processed structural MRI data

head-motion-from-mri

Code for the paper "Estimating Head Motion from MRI", which predicts motion scores directly from MRI images.

head-motion-tools

hipsta

HIPSTA - a python package for hippocampal shape and thickness analysis

lapy

Toolbox for Differential Geometry on Triangle and Tetrahedra Meshes (FEM, Laplace, Poisson, Heat Flow ...)

olf-bulb-segmentation

Automated Olfactory Bulb Segmentation Pipeline for T2-Weighted MRI

whippersnappy

Python OpenGL Tool for Screenshots of Surface Overlays