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intervaltree-guava

Java implementation of interval trees, using Range from Guava.

intervaltree-redblack

Self balancing interval tree in java, with scala tests! hurraay

isotopic-tree

java-electron-tutorial

How to build Java Desktop applications with Electron

javafx-d3

Provides a Java API to use the JavaScript library d3.js with the JavaFx WebView

javolution

The Java Solution for Real-Time and Embedded Systems

javolution-msftbx

A copy of the official release from http://javolution.org with minor changes

jaydio

A Java library to perform direct I/O in Linux, bypassing file page cache.

jcobyla

Java port of COBYLA2 nonlinear constrained optimization method

jfreechart

A 2D chart library for Java applications (JavaFX, Swing or server-side).

jmef

Maintenance fork of jMEF - A Java library to create, process and manage mixtures of exponential families

jmzidentml

Automatically exported from code.google.com/p/jmzidentml

jnitl

JNI Template Library

joptimizer

Personal fork of Joptimizer project with minor performance enhancements.

jsat

Java Statistical Analysis Tool, a Java library for Machine Learning

katacoda-scenarios

Katacoda Scenarios

krypton

Krypton WinForms components for .NET

learning-gradle

My slow path exploring the possibility to migrate to Gradle

logseq

A privacy-first, open-source platform for knowledge management and collaboration. Desktop app download link: https://github.com/logseq/logseq/releases, roadmap: https://trello.com/b/8txSM12G/roadmap

lucxor

JAVA-based implementation of LuciPHOr that can process any variable PTM.

maven-multi-level-modules-project

miglayout

Official MiG Layout for Swing, SWT and JavaFX

mkdocs

Project documentation with Markdown.

mkdocs-material

A Material Design theme for MkDocs

mmass

A copy of mmass v.5.5.0 source code

ms-numpress

Implementations of compression schemes for numeric data from mass spectrometers.

msdapl

Automatically exported from code.google.com/p/msdapl

msdk

MSDK source code repository

msfragger-gui

The project has migrated to https://github.com/Nesvilab/FragPipe

msftbx

MS File ToolBox - tools for parsing some mass-spectrometry related file formats (mzML, mzXML, pep.xml, prot.xml, etc.)