Comments (3)
jk86754
commented on July 19, 2024
Also, is there an mm10 version of a similar mouse dataset?
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cbravo93
commented on July 19, 2024
Hi @jk86754!
The peaks as used in the tutorial can be retrieved from here. Regards on whether there is a similar mouse dataset, I am not sure if there is bulk ATAC for them (I do not work a lot with this system); you can check the resources mentioned in #12 . Also, in the sciATAC-seq Mouse Cell Atlas data from Cusanovich and Hill et al., 2018 you can find accessibility signatures from some of these cell types.
Let me know if you need more information!
C
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jk86754
commented on July 19, 2024
Thank you for the info!
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