williamwzt Goto Github PK

n_limitation_of_decomposition

Colin and Bonnie make nitrogen great again.

netcomi

Network Comparison for Microbial Compositional Data

netmoss

netmoss2

nucleotide_dna_sequence_analysis

I try to download nucleotide sequence from GenBank such as NCBI, align and make a tree through R

orchard

Extending the Orchard Plot for Meta-analysis

orfik

paper_shade_curropinmicro

Containing script for investigating core microbiota

pd_meta_analysis

These scripts are inteded to be an extension of the method section in the paper "Meta-analysis of the Parkinson’s disease gut microbiome suggests alterations linked to intestinal inflammation"

pdfimager

Extract images from pdfs using poppler <https://poppler.freedesktop.org/>

plantmicrobesimulation

plsdabatch

R package for batch effect correction

predicting_psf_meta_analysis

All data and scripts for Beals & Moore et al. (2020) Predicting plant-soil feedback in the field: meta-analysis reveals that competition and environmental stress differentially influence PSF

prospectr

R package for processing and sample selection for vis-NIR spectral data

qsip

R package to perform calculations on data produced from quantitative stable isotope probing (qSIP) experiments

r-ecology-lesson

:notebook: Data Carpentry R lessons on ecology.

r-fieldspectra

R library for importing and processing field spectroscopy data collected with ASD and Spectral Evolution instruments

r_regression

Searching the best regression model using R (correlation filter, data scaling, best regression model, etc.)

rbec

rootnav-2.0

Plant Phenotyping APP

sheng-xin-xiao-bai-yu

历史文档备份（只包含2019年和2020年）

sheng-xin-xiao-bai-yu-2021

历史文档备份（2021年）

simplerspec

Streamlining data processing and modeling for spectroscopy applications

soilphysics

Basic and model-based soil physical analyses

soilspec

The soilspec package

sovacool_optifit_msphere_2022

The manuscript accompanying the OptiFit algorithm in mothur

spectrolab

Dealing with spectral data in R

spieceasi

Sparse InversE Covariance estimation for Ecological Association and Statistical Inference

thesis-r-scripts

BENEFICIAL PLANT˗MICROBE INTERACTION IN AGROECOSYSTEMS: DECIPHERING THE RHIZOSPHERE MICROBIAL COMMUNITY IN FIELD GROWN Brassica napus L.

tools-microbiome-analysis

A list of R environment based tools for microbiome data exploration, statistical analysis and visualization