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citrus_deeplearning

dcgn_deeplearning

deep-drug-response

deep_learning_methylation

This research explores machine learning and deep learning approach for analyzing DNA methylation data

deeptype

drug.rep_bc

In this study we aimed to find repurposed drug candidates for immunotherapy of breast cancer using single cell data analysis.

dual-tcr-in-cancer

Re-analysis of a publicly available single cell TCR sequence dataset from human cancer patients (Zheng, et al. 2021)

gbmatlas

gene-fusion_nb_frontier

jasmine

Single cell RNAseq Signature scoring

l1000_dili_frontier

Use transcriptomics from LINCS L1000 to predict DILI

mao_et_al_rb_frontier

Code for the RB project

molecularsubtypes_deeplearning

Classifying Breast Cancer Molecular Subtypes

ncomms_nsclc_scfibs

Code Associated with the Nature Communications Publication entitled "Single-cell analysis reveals prognostic fibroblast subpopulations linked to molecular and immunological subtypes of lung cancer"

nk_signature_crc_frontier

nsclc-immunotherapy

Tumor microenvironment remodeling after neoadjuvant immunotherapy in non-small cell lung cancer revealed by single-cell RNA sequencing

opmd_proj_frontier

pancancer_caf_frontier

scrna-ccrcc_frontier

processed data of ccRCC scRNA-seq

scrna-seq_notes

A list of scRNA-seq analysis tools

single-cell-data-process

v2ray_backup

zeitgeist_tcga_geo_deeplearning