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chime_sims

Bayesian fit to SEIR model. An extension to Penn Medicine's CHIME tool.

chmm

Coupled Hidden Markov Models

circuitscape.jl

Algorithms from circuit theory to predict connectivity in heterogeneous landscapes

clark2007

Code examples from Models for Ecological Data

climate_bayesian

Code and data used to evaluate climate change impacts on riparian recruitment in the Gila River.

code

Source code for the General Ocean Turbulence Model

codenameone-demos

The demos for Codename One

couplingswatandefdc

MATLAB script for coupling SWAT and EFDC

creating-maps-in-r

Introductory tutorial on graphical display of geographical information in R.

custom_efdc

Customized Environmental Fluid Dynamics Code

dashboard

hecdev.net dashboard

data-science-ipython-notebooks

Data science Python notebooks: Deep learning (TensorFlow, Theano, Caffe, Keras), scikit-learn, Kaggle, big data (Spark, Hadoop MapReduce, HDFS), matplotlib, pandas, NumPy, SciPy, Python essentials, AWS, and various command lines.

datacloning4studydesign

Data and code to accompy the manuscript "Study design and parameter estimability for spatial and temporal ecological models"

dbda-python

Doing Bayesian Data Analysis, 2nd Edition (Kruschke, 2015): Python/PyMC3 code

debinfer

Bayesian inference for dynamical models of biological systems in R

demes_et_al_2020desiccation

This is the repository associated with Demes et al. 2020. Multiple stressors drive convergent evolution of unique performance properties in marine macrophytes. See README.txt for more information on what is contained in the repo. If you have any questions please contact the authors directly.

dengue-forecasting-project-2015

Dengue Forecasting Project Data Repository

devedm

Pure Python developmental EDM

diffeqbayes.jl

Extension functionality which uses Stan.jl, DynamicHMC.jl, and Turing.jl to estimate the parameters to differential equations

direnzo_etal_eco-evo

dismod_mr

An Integrative Metaregression Framework for Descriptive Epidemiology

dissertation_latex

distributed-models

Tools to distribute SUSTAIN and LSPC model runs across computers.

distribution-is-all-you-need

The basic distribution probability Tutorial for Deep Learning Researchers

doing_bayesian_data_analysis

Python/PyMC3 versions of the programs described in Doing bayesian data analysis by John K. Kruschke

domino

Cascading effects project

e-otis

A MATLAB package with enhanced interface for stream solute model merging OTIS and QUAL2E models

eaaf.shorebirds

earthengine-api

Python and JavaScript bindings for calling the Earth Engine API.

earthengine-deep-learning

Land Cover Classification based on Landsat-8 imagery from Google Earth Engine