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Vivian Leung's Projects

datasci-utils icon datasci-utils

Assortment of helper functions and objects geared toward data science programming

enabrowsertools icon enabrowsertools

A collection of scripts to assist in the retrieval of data from the ENA Browser

fqtools icon fqtools

An efficient FASTQ manipulation suite

gramtools icon gramtools

Genome inference from a population reference graph

hypertraps icon hypertraps

HyperTraPS discrete time framework for inferring high-dimensional pathways of trait acquisition.

learning-threejs icon learning-threejs

Code repository for the examples from the Packt book "Learning Threejs"

mykrobe icon mykrobe

Antibiotic resistance prediction in minutes

online-cv icon online-cv

A minimal Jekyll Theme to host your resume (CV) on GitHub with few clicks.

pandas icon pandas

Flexible and powerful data analysis / manipulation library for Python, providing labeled data structures similar to R data.frame objects, statistical functions, and much more

pmodeltest icon pmodeltest

Python implementation of modeltest/prottest supporting proteins and nucleotides (can be run in parallel).

tbru_serialtb icon tbru_serialtb

Population dynamics of Mycobacterium tuberculosis within hosts during treatment.

vcfpy icon vcfpy

Python 3 library with good support for both reading and writing VCF

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