Related Issues (20)
- Align transcriptome data to an already-constructed pangenome graph HOT 4
- Incorrect substitution sequences in `vg inject`
- Release vg v1.59.0
- vg convert unable to write rGFA tags HOT 4
- Can GAF format reports the segment sequence and the query sequence? HOT 3
- Is it possible to regenotype a VCF using giraffe? HOT 1
- GAF file empty with vg giraffe HOT 3
- Low-complexity pruning is slow in surjection
- Turn off surjection anchor limit by default
- Bump necessary magic numbers for long-read index types HOT 1
- vg autoindex --workflow mpmap HOT 1
- GAF nodes do not correspond to VCF nodes HOT 3
- Fastq analysis in euka HOT 2
- Protobuf errors mapping HOT 4
- vg augment crashes in combination with giraffe .gam outputs HOT 5
- when i do the code :vg stats -a var1.gam > var1.stats ,show me a bug HOT 2
- vg surject and pack fail on GraphAligner produced .gam HOT 4
- About the usage of vg deconstruct HOT 5
- Right method to annotate genes on pangenome graph HOT 1
- vg call report missing allele HOT 2
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