vertesy / acm.tomoseq

Analysis scripts for the manuscript: "Spatial transcriptomics unveils ZBTB11 as a regulator of cardiomyocyte degeneration in arrhythmogenic cardiomyopathy".

Spatial transcriptomics unveils ZBTB11 as a regulator of cardiomyocyte degeneration in arrhythmogenic cardiomyopathy.

Analysis scripts

Authors: Cornelis J. Boogerd1†, Grégory P.A. Lacraz1†, Ábel Vértesy1,2†, Sebastiaan J. van Kampen1, Ilaria Perini1, Hesther de Ruiter1, Danielle Versteeg1, Andreas Brodehl3, Petra van der Kraak4, Mauro Giacca5, Nicolaas de Jonge6, Jan Philipp Junker7, Alexander van Oudenaarden1, Aryan Vink4‡, Eva van Rooij1,6‡*

The aim of this repository is to provide an insight, and be a transparent about the analyses, as well as to help readers build similar pipelines.

Therefore, the scripts are provided as a resource, not as an executable pipeline. The authors apologize to the reader, but cannot provide support on troubleshooting if the reader tries to run (parts of) the pipeline on his or her own machine.

We will try to answer conceptual questions, for that please use the issues tab, rather than sending private emails.

Thank you for reading.