So I used to use an old version of gscholar and made my own little python hack around it such that it copies the bibtex immediately to my .bib file but this version doesn't seem to be working anymore? Any reason why?
My last edit to this file seems to be april 10, 2016. Full code (single gscholar.py file):
#!/usr/bin/env python
# gscholar - Get bibtex entries from Goolge Scholar
# Copyright (C) 2011-2015 Bastian Venthur <venthur at debian org>
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation; either version 2 of the License, or (at
# your option) any later version.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
# General Public License for more details.
#
# You should have received a copy of the GNU General Public License
# along with this program; if not, write to the Free Software
# Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA
# 02110-1301, USA.
"""
Library to query Google Scholar.
Call the method query with a string which contains the full search
string. Query will return a list of citations.
"""
try:
# python 2
from urllib2 import Request, urlopen, quote
except ImportError:
# python 3
from urllib.request import Request, urlopen, quote
try:
# python 2
from htmlentitydefs import name2codepoint
except ImportError:
# python 3
from html.entities import name2codepoint
import re
import hashlib
import random
import sys
import os
import subprocess
import optparse
import logging
# fake google id (looks like it is a 16 elements hex)
rand_str = str(random.random()).encode('utf8')
google_id = hashlib.md5(rand_str).hexdigest()[:16]
GOOGLE_SCHOLAR_URL = "http://scholar.google.com"
# the cookie looks normally like:
# 'Cookie' : 'GSP=ID=%s:CF=4' % google_id }
# where CF is the format (e.g. bibtex). since we don't know the format yet, we
# have to append it later
HEADERS = {'User-Agent': 'Mozilla/5.0',
'Cookie': 'GSP=ID=%s' % google_id}
FORMAT_BIBTEX = 4
FORMAT_ENDNOTE = 3
FORMAT_REFMAN = 2
FORMAT_WENXIANWANG = 5
def query(searchstr, outformat=FORMAT_BIBTEX, allresults=False):
"""Query google scholar.
This method queries google scholar and returns a list of citations.
Parameters
----------
searchstr : str
the query
outformat : int, optional
the output format of the citations. Default is bibtex.
allresults : bool, optional
return all results or only the first (i.e. best one)
Returns
-------
result : list of strings
the list with citations
"""
logging.debug("Query: {sstring}".format(sstring=searchstr))
searchstr = '/scholar?q='+quote(searchstr)
url = GOOGLE_SCHOLAR_URL + searchstr
header = HEADERS
header['Cookie'] = header['Cookie'] + ":CF=%d" % outformat
request = Request(url, headers=header)
response = urlopen(request)
html = response.read()
html = html.decode('utf8')
# grab the links
tmp = get_links(html, outformat)
# follow the bibtex links to get the bibtex entries
result = list()
if not allresults:
tmp = tmp[:1]
for link in tmp:
url = GOOGLE_SCHOLAR_URL+link
request = Request(url, headers=header)
response = urlopen(request)
bib = response.read()
bib = bib.decode('utf8')
result.append(bib)
return result
def get_links(html, outformat):
"""Return a list of reference links from the html."""
if outformat == FORMAT_BIBTEX:
refre = re.compile(r'<a href="(/scholar\.bib\?[^"]*)')
elif outformat == FORMAT_ENDNOTE:
refre = re.compile(r'<a href="(/scholar\.enw\?[^"]*)"')
elif outformat == FORMAT_REFMAN:
refre = re.compile(r'<a href="(/scholar\.ris\?[^"]*)"')
elif outformat == FORMAT_WENXIANWANG:
refre = re.compile(r'<a href="(/scholar\.ral\?[^"]*)"')
reflist = refre.findall(html)
# escape html entities
reflist = [re.sub('&(%s);' % '|'.join(name2codepoint), lambda m:
chr(name2codepoint[m.group(1)]), s) for s in reflist]
return reflist
def convert_pdf_to_txt(pdf, startpage=None):
"""Convert a pdf file to text and return the text.
This method requires pdftotext to be installed.
"""
if startpage is not None:
startpageargs = ['-f', str(startpage)]
else:
startpageargs = []
stdout = subprocess.Popen(["pdftotext", "-q"] + startpageargs + [pdf, "-"],
stdout=subprocess.PIPE).communicate()[0]
return stdout
def pdflookup(pdf, allresults, outformat, startpage=None):
"""Look a pdf up on google scholar and return bibtex items."""
txt = convert_pdf_to_txt(pdf, startpage)
# remove all non alphanumeric characters
txt = re.sub("\W", " ", txt)
words = txt.strip().split()[:20]
gsquery = " ".join(words)
bibtexlist = query(gsquery, outformat, allresults)
return bibtexlist
def _get_bib_element(bibitem, element):
"""Return element from bibitem or None."""
lst = [i.strip() for i in bibitem.split("\n")]
for i in lst:
if i.startswith(element):
value = i.split("=", 1)[-1]
value = value.strip()
while value.endswith(','):
value = value[:-1]
while value.startswith('{') or value.startswith('"'):
value = value[1:-1]
return value
return None
def rename_file(pdf, bibitem):
"""Attempt to rename pdf according to bibitem."""
year = _get_bib_element(bibitem, "year")
author = _get_bib_element(bibitem, "author")
if author:
author = author.split(",")[0]
title = _get_bib_element(bibitem, "title")
l = [i for i in (year, author, title) if i]
filename = "-".join(l) + ".pdf"
newfile = pdf.replace(os.path.basename(pdf), filename)
print()
print("Will rename:")
print()
print(" %s" % pdf)
print()
print("to")
print()
print(" %s" % newfile)
print()
print("Proceed? [y/N]")
answer = input()
if answer == 'y':
print("Renaming %s to %s" % (pdf, newfile))
os.rename(pdf, newfile)
else:
print("Aborting.")
if __name__ == "__main__":
usage = 'Usage: %prog [options] {pdf | "search terms"}'
parser = optparse.OptionParser(usage)
parser.add_option("-a", "--all", action="store_true", dest="all",
default=False, help="show all bibtex results")
parser.add_option("-d", "--debug", action="store_true", dest="debug",
default=False, help="show debugging output")
parser.add_option("-r", "--rename", action="store_true", dest="rename",
default=False, help="rename file (asks before doing it)")
parser.add_option("-f", "--outputformat", dest='output',
default="bibtex",
help="Output format. Available formats are: bibtex, endnote, refman, wenxianwang [default: %default]")
parser.add_option("-s", "--startpage", dest='startpage',
help="Page number to start parsing PDF file at.")
(options, args) = parser.parse_args()
if options.debug is True:
logging.basicConfig(level=logging.DEBUG)
if options.output == 'bibtex':
outformat = FORMAT_BIBTEX
elif options.output == 'endnote':
outformat = FORMAT_ENDNOTE
elif options.output == 'refman':
outformat = FORMAT_REFMAN
elif options.output == 'wenxianwang':
outformat = FORMAT_WENXIANWANG
if len(args) != 1:
parser.error("No argument given, nothing to do.")
sys.exit(1)
args = args[0]
pdfmode = False
if os.path.exists(args):
logging.debug("File exist, assuming you want me to lookup the pdf: {filename}.".format(filename=args))
pdfmode = True
biblist = pdflookup(args, all, outformat, options.startpage)
else:
logging.debug("Assuming you want me to lookup the query: {query}".format(query=args))
biblist = query(args, outformat, options.all)
if len(biblist) < 1:
print("No results found, try again with a different query!")
sys.exit(1)
if options.all is True:
logging.debug("All results:")
for i in biblist:
print(i)
else:
logging.debug("First result:")
print(biblist[0])
if options.rename is True:
if not pdfmode:
print("You asked me to rename the pdf but didn't tell me which file to rename, aborting.")
sys.exit(1)
else:
rename_file(args, biblist[0])
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