Tools used to manipulate hydrograph data; Solinst xles to pandas dataframe; hydrograph analysis; hydrology; Gannt Charts; Piper diagrams; hydrogeology; wells; groundwater; USGS data; WQP data;
License: MIT License
need exception for zero in standard error calculation
Python 3 should work with all modules except Transpose. Working on fixing xml parsing errors with xmltodict
Write tests in pytest style
Make this set of functions more modular. Break apart functions into smaller pieces. Try to follow some of the structure laid out for MesoPy to better build rest requests and better handle http errors.
Add self to classes and improve functionality of functions
Center plot of piper plot not showing proper distribution of points. Some issue in how ion combos are calculated.
wa.avgMeths.projx
_proj.pyx in _proj.Proj.__cinit__ (_proj.c:1190)()
RuntimeError: ('Invalid argument', u'occurred at index 0')
42 inProj = Proj(init='epsg:4326') #WGS84
Sometimes gage stations have gage height and other variables reported with cfs. Find a way to include these.
Current usgs scripts require request library.
The calls are simple and can be replaced with urllib, a standard library in python.
See this part of the usgs.py file for an example.
import urllib
params = urllib.urlencode({'spam': 1, 'eggs': 2, 'bacon': 0})
f = urllib.urlopen("http://www.musi-cal.com/cgi-bin/query", params)
print f.read()This task will also require use of the standard json library.
in usgsGIS
Current station import drops some siteid due to variations in station types
Create a class that includes:
---------------------------------------------------------------------------`
KeyError Traceback (most recent call last)
<ipython-input-5-1abfc7093eba> in plotfits(HUC, SITE, fileloc)
28
29 # Grab USGS data for comparison
---> 30 nw = wa.nwis('dv',SITE,'sites', startDT='2003-01-01')
31 data = nw.data
32 Label = nw.sites.station_nm[0].title()
c:\users\paulinkenbrandt\documents\github\env\lib\site-packages\wellapplication\usgs.pyc in __init__(self, service, values, loc_type, **kwargs)
48 self.end_date = str(datetime.today().year) + '-' + str(datetime.today().month).zfill(2) + '-' + str(
49 datetime.today().day).zfill(2)
---> 50 self.sites, self.data = self.get_nwis(**kwargs)
51
52 @staticmethod
c:\users\paulinkenbrandt\documents\github\env\lib\site-packages\wellapplication\usgs.pyc in get_nwis(self, **kwargs)
126
127 df = pd.DataFrame(dt[i]['values'][0]['value'])
--> 128 df.index = pd.to_datetime(df.pop('dateTime'))
129 df.value = df.value.astype(float)
130 df.index.name = 'datetime'
c:\users\paulinkenbrandt\documents\github\env\lib\site-packages\pandas\core\generic.pyc in pop(self, item)
523 Return item and drop from frame. Raise KeyError if not found.
524 """
--> 525 result = self[item]
526 del self[item]
527 try:
c:\users\paulinkenbrandt\documents\github\env\lib\site-packages\pandas\core\frame.pyc in __getitem__(self, key)
2057 return self._getitem_multilevel(key)
2058 else:
-> 2059 return self._getitem_column(key)
2060
2061 def _getitem_column(self, key):
c:\users\paulinkenbrandt\documents\github\env\lib\site-packages\pandas\core\frame.pyc in _getitem_column(self, key)
2064 # get column
2065 if self.columns.is_unique:
-> 2066 return self._get_item_cache(key)
2067
2068 # duplicate columns & possible reduce dimensionality
c:\users\paulinkenbrandt\documents\github\env\lib\site-packages\pandas\core\generic.pyc in _get_item_cache(self, item)
1384 res = cache.get(item)
1385 if res is None:
-> 1386 values = self._data.get(item)
1387 res = self._box_item_values(item, values)
1388 cache[item] = res
c:\users\paulinkenbrandt\documents\github\env\lib\site-packages\pandas\core\internals.pyc in get(self, item, fastpath)
3539
3540 if not isnull(item):
-> 3541 loc = self.items.get_loc(item)
3542 else:
3543 indexer = np.arange(len(self.items))[isnull(self.items)]
c:\users\paulinkenbrandt\documents\github\env\lib\site-packages\pandas\indexes\base.pyc in get_loc(self, key, method, tolerance)
2134 return self._engine.get_loc(key)
2135 except KeyError:
-> 2136 return self._engine.get_loc(self._maybe_cast_indexer(key))
2137
2138 indexer = self.get_indexer([key], method=method, tolerance=tolerance)
pandas\index.pyx in pandas.index.IndexEngine.get_loc (pandas\index.c:4443)()
pandas\index.pyx in pandas.index.IndexEngine.get_loc (pandas\index.c:4289)()
pandas\src\hashtable_class_helper.pxi in pandas.hashtable.PyObjectHashTable.get_item (pandas\hashtable.c:13733)()
pandas\src\hashtable_class_helper.pxi in pandas.hashtable.PyObjectHashTable.get_item (pandas\hashtable.c:13687)()
KeyError: 'dateTime'
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