Comments (3)
no such functions like that currently exist. I will go about creating them and report back in this issue when they are finished.
from depmap.
these functions have been created on branch 19_Q3 and added with the latest pull request. if they are satisfactory, we can close this issue
from depmap.
Thanks. I'm checking the package at the moment.
Another change that you need to do every time you intend to push to Bioconductor is the version number. It is essential that the version number of bumped (i.e. higher than what is currently available on the Bioconductor git server), otherwise the new package will never be released. See http://bioconductor.org/developers/how-to/version-numbering/ for details.
In this case, both github and Bioc version are 0.99.5, and we need to bump to 0.99.6 on github.
from depmap.
Related Issues (20)
- Accessing latest 21Q3 data from Depmap package HOT 7
- depmap_drug_sensitivity function does not load all metadata HOT 1
- error in evaluating the argument 'x' in selecting a method for function 'get': argument is of length zero HOT 3
- Consider adding "essential" gene designations data HOT 9
- Change `depmap_crispr()` to pull from combined dataset rather than Achilles only HOT 1
- `depmap_drug_sensitivity()` throwing a 404 HOT 6
- "Dependency" in Drug Sensitivity Data HOT 1
- 2022 Version Problem HOT 1
- depmap_copyNumber() function does not return CN data; returns metadata table HOT 2
- Install Error HOT 2
- installation errors. HOT 16
- PRISM secondary screen? HOT 1
- Cannot connect to ExperimentHub server HOT 4
- installation of package ‘depmap’ had non-zero exit status HOT 8
- Hub has not been added to cache HOT 1
- cannot download HOT 4
- installation problem
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- Error: package or namespace load failed for ‘depmap’ ... error: ‘crispr_22Q1’ not found in ExperimentHub HOT 2
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