How to hide "ns" annotation about statannotations

[Kzra]

Hi @XuanhaoYang, If you just ran pip install statannotations then you won't have the dev branch version of the package.

Try uninstalling your version of the package with pip uninstall statannotations and then reinstalling the latest version of the package from the dev branch. If you have git installed than you can run pip install git+https://github.com/trevismd/statannotations.git@dev to do this.

With the dev branch version, you will be able to hide non significant p values. You will need to restart the Python kernel to see this change take effect. Hope this helps.

[trevismd]

Hello! Please see #110.

[XuanhaoYang]

Hello! Please see #110.

annotator =  Annotator(ax,pairs, data=df, x="gene",y="expression",hue="type",hide_non_significant=True)
annotator.configure(test='Mann-Whitney', text_format='star',line_width=0)
annotator.apply_and_annotate()

Did I make it right? I used hide_non_significant=True but still got "ns".

[trevismd]

This is correct. If you did install the package from the tip of the dev branch (commit 9b7f581), could you please provide a minimal but complete reproducible example of the code leading to the unexpected result?

[XuanhaoYang]

This is correct. If you did install the package from the tip of the dev branch (commit 9b7f581), could you please provide a minimal but complete reproducible example of the code leading to the unexpected result?

Sorry, I just use the command pip install statannotations to install the package. I don't know what do you mean by install the package from the tip of the dev branch (commit 9b7f581). How can I install the dev branch? Thanks.

[trevismd]

For posterity, use .configure(hide_non_significant=True) from v.0.6.0.