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Ezra Kitson's Projects

bioduino icon bioduino

A collection of life sciences related arduino projects.

bootstrap-jplace icon bootstrap-jplace

A shell script that will create an iTOL dataset of bootstrap symbols/labels to annotate a jplace tree created using the RAxML EPA algorithm.

chess2midi icon chess2midi

A python algorithm that converts chess games (in annotated PGN) to MIDI

corems icon corems

CoreMS is a comprehensive mass spectrometry framework for software development and data analysis of small molecules

doom-sampler icon doom-sampler

.sfz and associated .wav files for the plogue sforzando sample player

game-of-midi icon game-of-midi

A musical implementation of John Conway's Game of Life. Game of MIDI generates and plays MIDI notes based on the game of life simulation.

lichess-link icon lichess-link

Link an Arduino Uno with Wifi to the lichess.org API to play online chess the old fashioned way!

metrograph icon metrograph

A visual metronome that draws shapes to represent time signatures.

number-plate-game-solver icon number-plate-game-solver

A python program that gives solutions to the number plate game, in which players have to make a word out of the last three letters of a car number plate.

optimal-translate icon optimal-translate

For each sequence in a list of sequences, optimal-translate will translate in the reading frame with the least number of stop codons.

pykrev icon pykrev

FT-MS data analysis with Python

reelify icon reelify

This program is designed to give you the last t seconds of a recording when you press a hotkey. It is useful to capture moments of creativity without having to curate an entire recording, for example during a jam or brainstorming session.

simple-circularise icon simple-circularise

For a sequence or list of sequences, simple-circularise will circularise a linear sequence that should be circular but has been overlapped during assembly.

vhost-classifier icon vhost-classifier

For a list of taxon IDs, VHost-Classifier will filter out the viruses and then sort these viruses into groups based on their host lineage.

yaniv icon yaniv

A version of the Israeli card game Yaniv programmed in Python.

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