Topic: ome-zarr Goto Github
Some thing interesting about ome-zarr
Some thing interesting about ome-zarr
ome-zarr,Large-scale cell segmentation with cellpose.
Organization: allenneuraldynamics
Home Page: https://pypi.org/project/aind-large-scale-cellpose/
ome-zarr,Run encapsulated docker containers with BioFormats2Raw in the Amazon Web Services infrastructure.
Organization: distributedscience
ome-zarr,A nextflow based tool that wraps bfconvert and bioformats2raw to convert image data collections to OME-TIFF and OME-Zarr, respectively, in a parallelised manner.
Organization: euro-bioimaging
ome-zarr,Course materials for the practical on the Defragmentation Training School 2 - Porto, 8-12 May 2023
Organization: euro-bioimaging
ome-zarr,Python code that I used in my blog posts on the Zarr file format.
User: fabriziomusacchio
Home Page: https://www.fabriziomusacchio.com/blog/2022-10-24-Zarr_and_images/
ome-zarr,A collection of Image Processing and Analysis (IPA) functions used at the Facility for Advanced Imaging and Microscopy (FAIM)
Organization: fmi-faim
ome-zarr,GIve easy, high-level access to ome-zarr fileset
User: fmicompbio
Home Page: https://fmicompbio.github.io/ez_zarr/
ome-zarr,Main tasks for the Fractal analytics platform
Organization: fractal-analytics-platform
Home Page: https://fractal-analytics-platform.github.io/fractal-tasks-core/
ome-zarr,A simple native R reader for Zarr Arrays
User: grimbough
Home Page: https://bioconductor.org/packages/Rarr/
ome-zarr,ITK IO for images stored in OME-Zarr format.
Organization: insightsoftwareconsortium
ome-zarr,Inspector for NGFF-style containers supported by the N5 API (N5, HDF5, OME-Zarr)
Organization: janeliascicomp
ome-zarr,Fractal tasks for the Opera/Operetta microscope and drug profiling
Organization: leukemia-kispi
Home Page: https://leukemia-kispi.github.io/operetta-compose/
ome-zarr,Document available viewers and other tools for the OME-NGFF image format
Organization: ome
Home Page: https://ome.github.io/ome-ngff-tools
ome-zarr,Web page for validating OME-NGFF files
Organization: ome
Home Page: https://ome.github.io/ome-ngff-validator
ome-zarr,Implementation of next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.
Organization: ome
Home Page: https://pypi.org/project/ome-zarr
ome-zarr,A lean and kind Open Microscopy Environment (OME) Next Generation File Format (NGFF) Zarr implementation.
User: thewtex
Home Page: https://ngff-zarr.readthedocs.io
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