Repository for simulated genetic data presented by Nunes and Balding (2010). See https://paperswithcode.com/dataset/summaries-of-genetic-variation for details.
The data comprise
-
csv/coal.csv
: 100,000 simulations with $\theta\sim\mathrm{Uniform}\left(2,10\right) $ and$\rho\sim\mathrm{Uniform}\left(0,10\right) $ , where $\theta $ is the scaled mutation rate and $\rho $ is the scaled recombination rate. -
csv/coalobs.csv
: 100 simulations with the same prior distribution as forcsv/coal.csv
. -
csv/coaloracle.csv
: 1,000,000 simulations with $\theta\sim\mathrm{Uniform}\left(0,10\right) $ and$\rho\sim\mathrm{Uniform}\left(0,10\right) $ .
Run
make csv
to download data and regenerate the CSV files (Rscript
andcurl
must be installed).make rda.shasum
to regenerate the checksum file to validate the integrity of the input data (shasum
andcurl
must be installed).make rda/validate
to validate therda
input files checksums (shasum
andcurl
must be installed).