tbep-tech / seagrasstransect Goto Github PK

In 'About' section, suggest stating that this is for annual transect training evaluation (as opposed to looking at annual data)

@fawda123 could you please replace the average with the median on the shiny abundance graphs?

• Create data import functions for data/Class_Data_20190627.xlsx "All data" worksheet
• Summarize data by site/agency/species to report Bran-Blanquet coverage scores, shoot height, shoot density
• Produce comparative plots for the summaries and host on index.Rmd

Def no rush, but can you make the training dashboard sortable by year before the summer (given that we only really need to see one year of training data at a time and they are unrelated to anything else). Maybe an additional dropdown option (year) on the first tab? And will need it to flow to crew & download tabs as well.

I'm thinking about:

• Median line for abundance
• Both median and mean lines for root/shoot
• 'MonitoringAgency' as horizontal label
• Table on one side that cross-references the MA and 'Crew' (there is a decent chance that one or more MAs will have 2+ crews).
• And I'd please like to be able to export all of the graphs (with appropriate titles) as a single, multi-paged, pdf, similar to this: https://drive.google.com/open?id=1ssHZA5ZX9zao2KTNDFlBpwdzB5pE8TyX

Was watching the video and realized this was misspelled on a graph that was pulled from the shiny app

When the table is rendered on GH actions, the formatting from flextable is ignored (e.g., commas in year column). Maybe try build on a different OS again.

There are a couple of old transects that should be removed from the active map, both are (now) listed with agency as none in the layer I think you're using; lmk if you need me to alter the GIS layers more:

*S3T2 (discontinued in 2012)
*S4T12 south (moved to north transect, idk when this happened)

Def no rush, but can you make the training dashboard sortable by year before the summer (given that we only really need to see one year of training data at a time and they are unrelated to anything else). Maybe an additional dropdown option (year) on the first tab? And will need it to flow to crew & download tabs as well.

Summarize each plot by CV or something like that, make a heat map to compare the results, faceted

transect should be coded by crew

@fawda123 I'm going to go back in to the data and do a better job of randomization for demonstration. Can't remember if asked about this before, please do bar graphs, with segment/transect on horizontal and parameter (abundance, root count, or shoot count) on vertical, similar to this:
https://drive.google.com/open?id=1ssHZA5ZX9zao2KTNDFlBpwdzB5pE8TyX
Thanks,
Gman