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Materials for hosting seagrass transect assessement results on Water Atlas and few other random things (see README)

Home Page: https://tampabay.wateratlas.usf.edu/seagrass-monitoring/

CSS 11.11% R 88.89%
dashboard seagrass shiny tampa-bay tbep water-quality

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mikewessel

seagrasstransect's Issues

About (description)

In 'About' section, suggest stating that this is for annual transect training evaluation (as opposed to looking at annual data)

Annual update for training data

Def no rush, but can you make the training dashboard sortable by year before the summer (given that we only really need to see one year of training data at a time and they are unrelated to anything else). Maybe an additional dropdown option (year) on the first tab? And will need it to flow to crew & download tabs as well.

Transect map labels

There are a couple of old transects that should be removed from the active map, both are (now) listed with agency as none in the layer I think you're using; lmk if you need me to alter the GIS layers more:

*S3T2 (discontinued in 2012)
*S4T12 south (moved to north transect, idk when this happened)

Continuing to improve a sweet seagrass dashboard

I'm thinking about:

  • Median line for abundance
  • Both median and mean lines for root/shoot
  • 'MonitoringAgency' as horizontal label
  • Table on one side that cross-references the MA and 'Crew' (there is a decent chance that one or more MAs will have 2+ crews).
  • And I'd please like to be able to export all of the graphs (with appropriate titles) as a single, multi-paged, pdf, similar to this: https://drive.google.com/open?id=1ssHZA5ZX9zao2KTNDFlBpwdzB5pE8TyX

Initial workflow for training transect analysis

  • Create data import functions for data/Class_Data_20190627.xlsx "All data" worksheet
  • Summarize data by site/agency/species to report Bran-Blanquet coverage scores, shoot height, shoot density
  • Produce comparative plots for the summaries and host on index.Rmd

Annual update to training data

Def no rush, but can you make the training dashboard sortable by year before the summer (given that we only really need to see one year of training data at a time and they are unrelated to anything else). Maybe an additional dropdown option (year) on the first tab? And will need it to flow to crew & download tabs as well.

rendered FO table has odd formatting

When the table is rendered on GH actions, the formatting from flextable is ignored (e.g., commas in year column). Maybe try build on a different OS again.

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