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fastp

A FASTQ preprocessor with full features (QC/adapters/trimming/filtering/splitting...)

forum

蓝灯(Lantern)官方论坛

forum-1

fuscc-pcmc-brca-target-sequencing

Remarkable advances in next-generation sequencing technology enable the wide usage of sequencing as a clinical tool. Here, we conducted a large-scale prospective clinical sequencing program using the Fudan-BC panel, and comprehensively analyzed the clinical and genomic characteristics for Chinese breast cancer. A total of 1,134 consecutive Chinese patients who were treated at the Department of Breast Surgery at Fudan University Shanghai Cancer Center (FUSCC).

fusionscan

a fast and accurate prediction tool for fusion genes from RNA-seq data

genefuse

Gene fusion detection and visualization

genstats

Statistics course for JHU Genomic Data Science Sequence

ggsashimi

Command-line tool for the visualization of splicing events across multiple samples

hadal_snailfish

hamfa

Hypoxia associated molecular feature analysis

hic_tools

A collection of tools for Hi-C data analysis

hifi-human-wgs-wdl

hifiadapterfilt

Remove CCS reads with remnant PacBio adapter sequences and convert outputs to a compressed .fastq (.fastq.gz).

hma

Human Muscle Ageing Cell Atlas

hmftools

Various algorithms for analysing genomics data

hotspot

humant2tphasedgenome

ihcount

IHC-image analysis workflow

illumina-450k-analysis

From IDAT to beta.

immucc

immunophenogram

infiniumpurify

:exclamation: This is a read-only mirror of the CRAN R package repository. InfiniumPurify — Estimate and Account for Tumor Purity in Cancer Methylation Data Analysis

interesting-python

有趣的Python爬虫和Python数据分析小项目(Some interesting Python crawlers and data analysis projects)

jiang-lab

knowledge

concepts about methylation

learn-bioinformatics

liger

R package for integrating and analyzing multiple single-cell datasets

lncrna-m6a

Predict m6A sites in lncRNA

ls-blog

JavaScript日常记录 github上的个人博客

m1a-prediction