Comments (3)
Hi,
Thank you for bringing this to my attention. I've just found out that that the genome server was discontinued. We are now moving the genomes to a new location and this functionality should start working shortly. I'll let you know when it is working.
Best,
Steven
from fastq-screen.
Hi,
This should now be working. Please let me know if you have any problems downloading the genomes via FastQ Screen.
Best,
Steven
from fastq-screen.
It has been brought to my attention that some users are still having problems downloading the genomes. This seems to be a result of the old server location being saved on their machines. To solve this issue, delete the file genome_locations.txt you downloaded from before and then try again.
Steven
from fastq-screen.
Related Issues (20)
- R1 and R2 generate map differently to the human genome HOT 4
- Error with certificate for --get-genome HOT 7
- Error while performing --bisulfite read mapping HOT 4
- --get_genomes download failed HOT 8
- Support for STAR HOT 2
- Fail to install GD module HOT 1
- can we download a subset of index database? HOT 1
- Only "no hits" in the output!! HOT 3
- Question- how to include no hit reads into final fastq data while screening? HOT 1
- Using pigz for parallel gzip operations HOT 2
- FastQC on output HOT 5
- Skipping DATABASE HOT 1
- issue installing.. HOT 1
- Filtering bisulfite fastq files HOT 3
- Unable to download v0.15.3 FastQ-Screen or --get_genomes HOT 1
- Filtering was killed HOT 1
- Doesn't match if U nucleotide used in sequence HOT 3
- No reference genomes were configured, please adjust configuration HOT 4
- Question on reads mapping to multiple genomes HOT 1
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from fastq-screen.