Comments (1)
StevenWingett
commented on August 26, 2024
Hi,
It seems as though you are unable to install the Perl module GD graph on your system. I would check the GD graph / Perl documentation for more advice on this - I believe the relevant page is here https://metacpan.org/pod/GD::Graph
However, the good news is that this module is NOT essential for FastQ Screen to run - the pipeline will still produce text and HTML summary reports. So, you can still use FastQ Screen, even if this module is not installed.
I hope that helps,
Steven
from fastq-screen.
Related Issues (20)
- R1 and R2 generate map differently to the human genome HOT 4
- Error with certificate for --get-genome HOT 7
- Error while performing --bisulfite read mapping HOT 4
- --get_genomes download failed HOT 8
- Support for STAR HOT 2
- Fail to install GD module HOT 1
- can we download a subset of index database? HOT 1
- Only "no hits" in the output!! HOT 3
- Question- how to include no hit reads into final fastq data while screening? HOT 1
- Using pigz for parallel gzip operations HOT 2
- FastQC on output HOT 5
- Skipping DATABASE HOT 1
- Filtering bisulfite fastq files HOT 3
- Unable to download v0.15.3 FastQ-Screen or --get_genomes HOT 1
- Filtering was killed HOT 1
- Doesn't match if U nucleotide used in sequence HOT 3
- Reference genomes on Babraham Bioinformatics website are no longer available for download HOT 3
- No reference genomes were configured, please adjust configuration HOT 4
- Question on reads mapping to multiple genomes HOT 1
Recommend Projects
-
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
-
Vue.js
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
-
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
-
TensorFlow
An Open Source Machine Learning Framework for Everyone
-
Django
The Web framework for perfectionists with deadlines.
-
Laravel
A PHP framework for web artisans
-
D3
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
-
Recommend Topics
-
javascript
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
-
web
Some thing interesting about web. New door for the world.
-
server
A server is a program made to process requests and deliver data to clients.
-
Machine learning
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
-
Visualization
Some thing interesting about visualization, use data art
-
Game
Some thing interesting about game, make everyone happy.
Recommend Org
-
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
-
Microsoft
Open source projects and samples from Microsoft.
-
Google
Google ❤️ Open Source for everyone.
-
Alibaba
Alibaba Open Source for everyone
-
D3
Data-Driven Documents codes.
-
Tencent
China tencent open source team.
from fastq-screen.