Integrative Differential expression and gene set Enrichment Analysis for single cell RNAseq studies
# install devtools if necessary
install.packages('devtools')
# install the iDEA package
devtools::install_github('xzhoulab/iDEA')
# load package
library(iDEA)
Shiquan Sun, Ying Ma, Mengjie Chen and Xiang Zhou. Integrative differential expression and gene set enrichment analysis for single cell RNAseq studies, BioRxiv, 2019.
Details in here