Related Issues (20)
- Only enable broken link checker on `master`, and not PRs
- `OSError: [Errno 5] Input/output error` when splitting dMRI file during `sct_run_batch -jobs 1` experiment HOT 2
- Change `-install-task` to `-install` HOT 1
- Add QC feature for `sct_deepseg` HOT 3
- Does `-param deformation` have an impact when used with `algo=rigid`? HOT 2
- Make it possible to remove lines in a QC report HOT 2
- Integrate latest version of contrast-agnostic model HOT 5
- Set up release testing scripts and documentation HOT 2
- Add canproco nnUNet model to sct_deepseg models
- `ValueError: not enough values to unpack` from nnunetv2 on master
- `-c` (`contrast`) field is not useful or 95% of deepseg models (and is unintuitive for contributors) HOT 2
- Installation of SCT 6.2 failed on macos 10.15 HOT 5
- Refactor `sct_deepseg` to store model orientation in model dict HOT 4
- Debian Rolling Release CI runs are failing due to `libglib2.0-0` dependency installation
- Integration of EPI segmentation nnUNet model in SCT HOT 3
- Outdated Node.js 16 action present in `automate-changelog-PR.yml` HOT 1
- What colormap should be used for soft segmentation QCs? (single color vs. gradient) HOT 15
- Sagittal mosaic QC report is tiny for 1.0mm istropic image with 75 slices HOT 5
- Running SCT commands in 3DSlicer GUI? HOT 3
- Fix issues with `sct_deepseg` rootlets QC report HOT 1
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