Comments (3)
Note: there is already code from @valosekj https://github.com/spinalcordtoolbox/spinalcordtoolbox/pull/3172/files, but i'm not sure what is the plan with this (old) branch
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In the past, @renelabounek and I were facing a similar issue with axial T2*w images. We wrote this matlab script for slice-by-slice correction. The script works as follows:
% 1) Spliting input image into two images - odd and even slices and interpolate empty slices
% 2) Register images (fixed image - image with original even slices; moving image -image with original odd slices) by isct_antsSliceRegularizedRegistration function (called by slice_reg.sh)
% Receive image: odd_to_even
% 3) Perform combination of registred odd_to_even image and image with fixed even slices
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See also:
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Related Issues (20)
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