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Steffen Möller's Projects

mirtop icon mirtop

command lines tool to annotate miRNAs with a standard mirna/isomir naming

multiqc icon multiqc

Aggregate results from bioinformatics analyses across many samples into a single report.

nanomath icon nanomath

A few simple math function for other Oxford Nanopore processing scripts

ngmlr icon ngmlr

NGMLR is a long-read mapper designed to align PacBio or Oxford Nanopore (standard and ultra-long) to a reference genome with a focus on reads that span structural variations

nim-regex icon nim-regex

Pure Nim regex engine. Guarantees linear time matching

nodogsplash icon nodogsplash

Nodogsplash offers a simple way to provide restricted access to an Internet connection using a captive portal. Pull requests are welcome!

nydax icon nydax

NYDAX Open Source Digital Asset Exchange in React JS and Node

openbabel icon openbabel

Open Babel is a chemical toolbox designed to speak the many languages of chemical data.

opentrade icon opentrade

An open source OEMS, and intraday algorithmic trading platform in modern C++ for professional quant

openwrt icon openwrt

This repository is a mirror of https://git.openwrt.org/openwrt/openwrt.git It is for reference only and is not active for check-ins or for reporting issues. We will continue to accept Pull Requests here. They will be merged via staging trees then into openwrt.git. All issues should be reported at: https://bugs.openwrt.org

peertube icon peertube

ActivityPub-federated video streaming platform using P2P directly in your web browser

phyx icon phyx

phylogenetics tools for linux (and other mostly posix compliant) computers

picard icon picard

A set of command line tools (in Java) for manipulating high-throughput sequencing (HTS) data and formats such as SAM/BAM/CRAM and VCF.

pindel icon pindel

Pindel can detect breakpoints of large deletions, medium sized insertions, inversions, tandem duplications and other structural variants at single-based resolution from next-gen sequence data. It uses a pattern growth approach to identify the breakpoints of these variants from paired-end short reads.

plasmidid icon plasmidid

PlasmidID is a mapping-based, assembly-assisted plasmid identification tool that analyzes and gives graphic solution for plasmid identification.

pokrok icon pokrok

Use any progress bar package with a simple API (production)

pssh2 icon pssh2

Scripts for generating pssh2

pybedtools icon pybedtools

Python wrapper -- and more -- for Aaron Quinlan's BEDTools (bioinformatics tools)

pybel icon pybel

A pure Python package for parsing, validating, compiling, and converting networks encoded in BEL

pychopper icon pychopper

A tool to identify, orient, trim and rescue full length cDNA reads

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