Comments (4)
Hi Shiquan !
I am also interested in specifying user defined cut-offs. For targeted sequencing , 4X/10X.30X are very low cut-offs. I want to view bamfile based upon the higher cut-offs such as 200X/500X/1000X.
How can I set this cut-off in bamdst ?
Can you please also let me know how can I cite bamdst if I used it in my work ?
Thanks
from bamdst.
Hi Shiquan !
Have this request been solved?
from bamdst.
Hello Shiquan,
No not yet. So I wrote my own script for calculation of the same. However if it is still possible with bamdst please let me know.
Thanks
from bamdst.
now support.
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Related Issues (20)
- 请问使用您的软件,如何引用? HOT 1
- what should i do? HOT 1
- Segmentation fault (core dumped) HOT 9
- multithreading support HOT 1
- make error HOT 1
- @@ ERROR ABORT @@ bam files are not properly sorted HOT 2
- Suggestion - making a bioconda recipe HOT 1
- make warning
- error 404 Issue installing private repos with devtools HOT 1
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- Segmentation fault (core dumped) HOT 3
- Multi-genomes HOT 5
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- [Target] Coverage (>0x) 100.00% but uncover.bed is not umpty HOT 1
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- Error ocurrus when use bamdst to stat WGS bam file HOT 7
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