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rbi

R package for Bayesian inference with state-space models using LibBi.

rbi.helpers

Helper functions for inference with LibBi. Building on the rbi library.

reconhub.github.io

Official website for RECON - The R Epidemics CONsortium

regional-secondary

Prototype function for forecasting a secondary observation from a primary observation across multiple regions. An example application of this function can be found here: https://github.com/epiforecasts/covid-german-forecasts/blob/master/rt-forecast/update-death-from-cases.R. See the documentation of EpiNow2 for more details: https://epiforecasts.io/EpiNow2/dev/

reveal.js

The HTML Presentation Framework

rrtools

rrtools: Tools for Writing Reproducible Research in R

sbfnk.github.io

sftp

R-package with convenience functions for SFTP operations wrapping RCurl functions

simple-latex-poster

A simple theme and template for making posters in LaTeX

sk.measles

Code accompanying the manuscript "Estimating contact-adjusted immunity levels against measles in South Korea and prospects for maintaining elimination status".

sk_covid_19

sn

:exclamation: This is a read-only mirror of the CRAN R package repository. sn — The Skew-Normal and Related Distributions Such as the Skew-t. Homepage: http://azzalini.stat.unipd.it/SN

spacemacs

A community-driven Emacs distribution - The best editor is neither Emacs nor Vim, it's Emacs *and* Vim!

ssm

Inference for State Space Models like playing with duplo blocks

stan_example

Stan example

test-netlify

trypanosomiasis

R code for trypanosomiasis analysis

vbd

Vector-bourne disease models

viforsdes

A variational method for fast, approximate inference for stochastic differential equations.

whitakerlabprojectmanagement

This repository contains issues related to the management of all Whitaker Lab projects