Samir Amin's Projects
Introduction to R for non-programmers using gapminder data.
Advanced R Statistics, forked from selva86/selva86.github.io See https://selva86.github.io
R for data science
RE2 is a fast, safe, thread-friendly alternative to backtracking regular expression engines like those used in PCRE, Perl, and Python. It is a C++ library.
About
power analysis for single-cell experiments. Forked from https://github.com/navinlabcode/scopit by Davis A, Gao R, Navin NE. SCOPIT: sample size calculations for single-cell sequencing experiments. BMC Bioinformatics 2019;20:566. https://doi.org/10.1186/s12859-019-3167-9.
Forked from https://github.com/parklab/ShatterSeek
The Unix Shell, source forked from https://swcarpentry.github.io/shell-novice/
Dockerfile to build jekyll/hugo/mkdocs-based website
A wrapper script to submit SLURM array jobs. Forked from https://github.com/zkamvar/SLURM_Array
slurmR: A Lightweight Wrapper for Slurm
Forked from https://github.com/jdblischak/smk-simple-slurm
Example data for the official Snakemake tutorial
Forked from the upstream source: https://github.com/snakemake/snakemake-wrappers
A Python script that exports all of your Spotify playlists.
Forked from https://github.com/squidfunk/mkdocs-material
course materials for participants to download
Analysis of subclonal copy number alterations (CNA) and loss of heterozygosity (LOH) in cancer
Snakemake workflow for JAX HPC Sumner
Forked version from
documentation repo for the YCRC, see src branch for more info