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Hi there 👋

I am an associate research scientist in Verhaak lab at the Department of Neurosurgery, Yale School of Medicine. I am working in the comparative genomics field to study evolutionary history of spontaneous canine and human glioma. My current work is focused on characterizing and targeting evolutionarily constrained genetic elements and underlying tissue-specific selection pressures that can drive tumor progression and therapy resistance. More

You can reach me either via tweeting or direct messaging @sbamin or contact here.

Samir Amin's Projects

r-stats-by-selva86 icon r-stats-by-selva86

Advanced R Statistics, forked from selva86/selva86.github.io See https://selva86.github.io

re2 icon re2

RE2 is a fast, safe, thread-friendly alternative to backtracking regular expression engines like those used in PCRE, Perl, and Python. It is a C++ library.

scopit icon scopit

power analysis for single-cell experiments. Forked from https://github.com/navinlabcode/scopit by Davis A, Gao R, Navin NE. SCOPIT: sample size calculations for single-cell sequencing experiments. BMC Bioinformatics 2019;20:566. https://doi.org/10.1186/s12859-019-3167-9.

shell-novice icon shell-novice

The Unix Shell, source forked from https://swcarpentry.github.io/shell-novice/

sitebuilder icon sitebuilder

Dockerfile to build jekyll/hugo/mkdocs-based website

slurm_array icon slurm_array

A wrapper script to submit SLURM array jobs. Forked from https://github.com/zkamvar/SLURM_Array

slurmr icon slurmr

slurmR: A Lightweight Wrapper for Slurm

snakemake-wrappers icon snakemake-wrappers

Forked from the upstream source: https://github.com/snakemake/snakemake-wrappers

titancna icon titancna

Analysis of subclonal copy number alterations (CNA) and loss of heterozygosity (LOH) in cancer

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