This repository used to be the user-facing mirror of the Sage source tree. As Sage development migrated on 2023-02-01 from https://trac.sagemath.org/ to our new repository on GitHub, https://github.com/sagemath/sage, we have renamed and archived this repository.
Home Page: https://www.sagemath.org
License: Other
I tried to run sudo apt-get install sagemath. It gives below error under ubuntu 16.04:
Reading package lists... Done
Building dependency tree
Reading state information... Done
Package sagemath is not available, but is referred to by another package.
This may mean that the package is missing, has been obsoleted, or
is only available from another source
E: Package 'sagemath' has no installation candidate
in sage , top-10 plugin doe not counts post views,
i think this action: " add_action( 'parse_request', 'tptn_parse_request' )" in counter.php file cause this problem
Hi sagemath team :)
I was searching for the changelogs for the sage 8.0 release but it only points to the 7.x release series.
The main thing that I was looking for is whether the Python3 related issues on the track that transition on the tickets, https://trac.sagemath.org/ticket/15980 and https://trac.sagemath.org/ticket/16052 mean that sagemath can now be used as a lib from python3 ?
Hello,
Thanks for working on sagemath. Unfortunately, sagemath doesn't build with 3.10.x. Here are the logs:
https://launchpadlibrarian.net/580381333/buildlog_ubuntu-jammy-amd64.sagemath_9.4-3build1_BUILDING.txt.gz
Is it already fixed in the develop branch of something?
Sorry for the title:
I find a bug in the matrix.pseudoinverse()
Basically, one first decomposes S = AB where rank(A) = rank(B) = rank(S).
But in certain circumstances, B could be an identity matrix, which makes S = A,
S^+ = (St * S)^(-1) * At and sometimes St*S is not full rank.
For example, the following matrix over GF(2) will fail over this implementation matrix.pseudoinverse()
[1 0 0 0 1 0 0 0 0 1]
[0 0 0 0 1 1 0 0 0 0]
[1 0 0 0 1 0 0 0 0 0]
[0 1 1 0 1 1 1 0 1 0]
[0 0 0 1 0 0 1 0 0 0]
[0 1 1 0 1 1 0 0 0 0]
[0 1 0 0 1 0 1 0 0 0]
[0 0 0 0 1 0 0 0 0 0]
[0 0 0 0 0 0 1 0 1 0]
[0 0 0 1 0 0 1 0 0 1]
[0 0 0 0 1 0 0 1 0 0]
[0 0 0 0 0 0 1 0 0 0]
I am trying to install "Sage" on Google Colab via the command:
!pip install git+https://github.com/sagemath/sage.git
I get the error:
Collecting git+https://github.com/sagemath/sage.git
Cloning https://github.com/sagemath/sage.git to /tmp/pip-req-build-ozlqhlkb
Running command git clone -q https://github.com/sagemath/sage.git /tmp/pip-req-build-ozlqhlkb
ERROR: File "setup.py" not found for legacy project git+https://github.com/sagemath/sage.git.
No module named 'sage.all_cmdline'
Traceback (most recent call last):
File "script.py", line 11, in <module>
from sage.all_cmdline import *
ModuleNotFoundError: No module named 'sage.all_cmdline'
Google Colab works on
Description: Ubuntu 18.04.5 LTS
Codename: bionic
model name: AMD EPYC 7B12
pip3 --version
pip 21.1.3 from /usr/local/lib/python3.7/dist-packages/pip (python 3.7)
Why can't I install "Sage" ? What could be the reasons for this error?
Perhaps it doesn't work with LLVM?
~/sage (master ✓) make
cd spkg &&
"../spkg/pipestatus"
"env SAGE_PARALLEL_SPKG_BUILD='' ./install all 2>&1"
"tee -a ../logs/install.log"
/bin/sh: line 0: cd: spkg: No such file or directory
make: *** [build] Error 1
~/sage (master ✓) gcc -v
Configured with: --prefix=/Applications/Xcode5-DP.app/Contents/Developer/usr --with-gxx-include-dir=/usr/include/c++/4.2.1
Apple LLVM version 5.0 (clang-500.1.58) (based on LLVM 3.3svn)
Target: x86_64-apple-darwin12.4.0
Thread model: posix
~/sage (master ✓) system_profiler SPSoftwareDataType
Software:
System Software Overview:
System Version: OS X 10.8.4 (12E55)
Kernel Version: Darwin 12.4.0
Boot Volume: Macintosh HD
Boot Mode: Normal
Secure Virtual Memory: Enabled
Time since boot: 4:46
I am watching this repository and there were several new issues/PRs recently- it seems not obvious that this is not a place where they should be submitted, moreover there are already other open issues and PRs. If this is a mirror of the repository and modifying the README file here is not an option, do you think it could help to change the description from "Mirror of the Sage source tree" to something like "Mirror of the Sage source tree (only a mirror - everything must be submitted via https://trac.sagemath.org/)" ?
Hello,
the 'list_of_elements_of_multiplicative_group' returns Python integers
instead of ring elements;#
R = Integers(15)
l=R.list_of_elements_of_multiplicative_group()
l[5]*l[5]
#121; I would expect 1.
should this be changed?
Hi,
I'm interested in the Sage software. However, I installed it into my computer and run for the first time. Here is the result:
***************************************************************************
IPython post-mortem report
{'commit_hash': u'5c9c918',
'commit_source': 'installation',
'default_encoding': 'UTF-8',
'ipython_path': '/home/wn/Documents/SageMath/local/lib/python2.7/site-packages/IPython',
'ipython_version': '5.1.0',
'os_name': 'posix',
'platform': 'Linux-4.11.11-300.fc26.x86_64-x86_64-with-fedora-26-Twenty_Six',
'sys_executable': '/home/wn/Documents/SageMath/local/bin/python',
'sys_platform': 'linux2',
'sys_version': '2.7.13 (default, Jul 22 2017, 00:49:06) \n[GCC 6.3.1 20161221 (Red Hat 6.3.1-1)]'}
***************************************************************************
***************************************************************************
Crash traceback:
---------------------------------------------------------------------------
---------------------------------------------------------------------------
ImportError Python 2.7.13: /home/wn/Documents/SageMath/local/bin/python
Tue Aug 8 21:49:30 2017
A problem occurred executing Python code. Here is the sequence of function
calls leading up to the error, with the most recent (innermost) call last.
/home/wn/Documents/SageMath/src/bin/sage-ipython in <module>()
1 #!/usr/bin/env python
2 # -*- coding: utf-8 -*-
3 """
4 Sage IPython startup script.
5 """
6
7 from sage.repl.interpreter import SageTerminalApp
8
9 app = SageTerminalApp.instance()
---> 10 app.initialize()
global app.initialize = <bound method SageTerminalApp.initialize of <sage.repl.interpreter.SageTerminalApp object at 0x7fe0caf2d1d0>>
11 app.start()
<decorator-gen-109> in initialize(self=<sage.repl.interpreter.SageTerminalApp object>, argv=None)
/home/wn/Documents/SageMath/local/lib/python2.7/site-packages/traitlets/config/application.pyc in catch_config_error(method=<function initialize>, app=<sage.repl.interpreter.SageTerminalApp object>, *args=(None,), **kwargs={})
72 TRAITLETS_APPLICATION_RAISE_CONFIG_FILE_ERROR = False
73 else:
74 raise ValueError("Unsupported value for environment variable: 'TRAITLETS_APPLICATION_RAISE_CONFIG_FILE_ERROR' is set to '%s' which is none of {'0', '1', 'false', 'true', ''}."% _envvar )
75
76
77 @decorator
78 def catch_config_error(method, app, *args, **kwargs):
79 """Method decorator for catching invalid config (Trait/ArgumentErrors) during init.
80
81 On a TraitError (generally caused by bad config), this will print the trait's
82 message, and exit the app.
83
84 For use on init methods, to prevent invoking excepthook on invalid input.
85 """
86 try:
---> 87 return method(app, *args, **kwargs)
method = <function initialize at 0x7fe0bd3c7d70>
app = <sage.repl.interpreter.SageTerminalApp object at 0x7fe0caf2d1d0>
args = (None,)
kwargs = {}
88 except (TraitError, ArgumentError) as e:
89 app.print_help()
90 app.log.fatal("Bad config encountered during initialization:")
91 app.log.fatal(str(e))
92 app.log.debug("Config at the time: %s", app.config)
93 app.exit(1)
94
95
96 class ApplicationError(Exception):
97 pass
98
99
100 class LevelFormatter(logging.Formatter):
101 """Formatter with additional `highlevel` record
102
/home/wn/Documents/SageMath/local/lib/python2.7/site-packages/IPython/terminal/ipapp.pyc in initialize(self=<sage.repl.interpreter.SageTerminalApp object>, argv=None)
294
295 return super(TerminalIPythonApp, self).parse_command_line(argv)
296
297 @catch_config_error
298 def initialize(self, argv=None):
299 """Do actions after construct, but before starting the app."""
300 super(TerminalIPythonApp, self).initialize(argv)
301 if self.subapp is not None:
302 # don't bother initializing further, starting subapp
303 return
304 # print self.extra_args
305 if self.extra_args and not self.something_to_run:
306 self.file_to_run = self.extra_args[0]
307 self.init_path()
308 # create the shell
--> 309 self.init_shell()
self.init_shell = <bound method SageTerminalApp.init_shell of <sage.repl.interpreter.SageTerminalApp object at 0x7fe0caf2d1d0>>
310 # and draw the banner
311 self.init_banner()
312 # Now a variety of things that happen after the banner is printed.
313 self.init_gui_pylab()
314 self.init_extensions()
315 self.init_code()
316
317 def init_shell(self):
318 """initialize the InteractiveShell instance"""
319 # Create an InteractiveShell instance.
320 # shell.display_banner should always be False for the terminal
321 # based app, because we call shell.show_banner() by hand below
322 # so the banner shows *before* all extension loading stuff.
323 self.shell = TerminalInteractiveShell.instance(parent=self,
324 profile_dir=self.profile_dir,
/home/wn/Documents/SageMath/local/lib/python2.7/site-packages/sage/repl/interpreter.pyc in init_shell(self=<sage.repl.interpreter.SageTerminalApp object>)
747 self.shell.has_sage_extensions = SAGE_EXTENSION in self.extensions
748
749 # Load the %lprun extension if available
750 try:
751 import line_profiler
752 except ImportError:
753 pass
754 else:
755 self.extensions.append('line_profiler')
756
757 if self.shell.has_sage_extensions:
758 self.extensions.remove(SAGE_EXTENSION)
759
760 # load sage extension here to get a crash if
761 # something is wrong with the sage library
--> 762 self.shell.extension_manager.load_extension(SAGE_EXTENSION)
self.shell.extension_manager.load_extension = <bound method ExtensionManager.load_extension of <IPython.core.extensions.ExtensionManager object at 0x7fe0bc033510>>
global SAGE_EXTENSION = 'sage'
763
764
/home/wn/Documents/SageMath/local/lib/python2.7/site-packages/IPython/core/extensions.pyc in load_extension(self=<IPython.core.extensions.ExtensionManager object>, module_str='sage')
70
71 Returns the string "already loaded" if the extension is already loaded,
72 "no load function" if the module doesn't have a load_ipython_extension
73 function, or None if it succeeded.
74 """
75 if module_str in self.loaded:
76 return "already loaded"
77
78 from IPython.utils.syspathcontext import prepended_to_syspath
79
80 with self.shell.builtin_trap:
81 if module_str not in sys.modules:
82 with prepended_to_syspath(self.ipython_extension_dir):
83 __import__(module_str)
84 mod = sys.modules[module_str]
---> 85 if self._call_load_ipython_extension(mod):
self._call_load_ipython_extension = <bound method ExtensionManager._call_load_ipython_extension of <IPython.core.extensions.ExtensionManager object at 0x7fe0bc033510>>
mod = <module 'sage' from '/home/wn/Documents/SageMath/local/lib/python2.7/site-packages/sage/__init__.pyc'>
86 self.loaded.add(module_str)
87 else:
88 return "no load function"
89
90 def unload_extension(self, module_str):
91 """Unload an IPython extension by its module name.
92
93 This function looks up the extension's name in ``sys.modules`` and
94 simply calls ``mod.unload_ipython_extension(self)``.
95
96 Returns the string "no unload function" if the extension doesn't define
97 a function to unload itself, "not loaded" if the extension isn't loaded,
98 otherwise None.
99 """
100 if module_str not in self.loaded:
/home/wn/Documents/SageMath/local/lib/python2.7/site-packages/IPython/core/extensions.pyc in _call_load_ipython_extension(self=<IPython.core.extensions.ExtensionManager object>, mod=<module 'sage' from '/home/wn/Documents/SageMath...l/lib/python2.7/site-packages/sage/__init__.pyc'>)
117 """
118 from IPython.utils.syspathcontext import prepended_to_syspath
119
120 if (module_str in self.loaded) and (module_str in sys.modules):
121 self.unload_extension(module_str)
122 mod = sys.modules[module_str]
123 with prepended_to_syspath(self.ipython_extension_dir):
124 reload(mod)
125 if self._call_load_ipython_extension(mod):
126 self.loaded.add(module_str)
127 else:
128 self.load_extension(module_str)
129
130 def _call_load_ipython_extension(self, mod):
131 if hasattr(mod, 'load_ipython_extension'):
--> 132 mod.load_ipython_extension(self.shell)
mod.load_ipython_extension = <function load_ipython_extension at 0x7fe0caf1e7d0>
self.shell = <sage.repl.interpreter.SageTerminalInteractiveShell object at 0x7fe0bd3efa10>
133 return True
134
135 def _call_unload_ipython_extension(self, mod):
136 if hasattr(mod, 'unload_ipython_extension'):
137 mod.unload_ipython_extension(self.shell)
138 return True
139
140 def install_extension(self, url, filename=None):
141 """Download and install an IPython extension.
142
143 If filename is given, the file will be so named (inside the extension
144 directory). Otherwise, the name from the URL will be used. The file must
145 have a .py or .zip extension; otherwise, a ValueError will be raised.
146
147 Returns the full path to the installed file.
/home/wn/Documents/SageMath/local/lib/python2.7/site-packages/sage/__init__.pyc in load_ipython_extension(*args=(<sage.repl.interpreter.SageTerminalInteractiveShell object>,))
1 __all__ = ['all']
2
3 # Make sure that the correct zlib library is loaded. This is needed
4 # to prevent the system zlib to be loaded instead of the Sage one.
5 # See https://trac.sagemath.org/ticket/23122
6 import zlib
7
8 # IPython calls this when starting up
9 def load_ipython_extension(*args):
10 import sage.repl.ipython_extension
---> 11 sage.repl.ipython_extension.load_ipython_extension(*args)
sage.repl.ipython_extension.load_ipython_extension = <function load_ipython_extension at 0x7fe0b7b868c0>
args = (<sage.repl.interpreter.SageTerminalInteractiveShell object at 0x7fe0bd3efa10>,)
/home/wn/Documents/SageMath/local/lib/python2.7/site-packages/sage/repl/ipython_extension.pyc in wrapper(*args=(<sage.repl.interpreter.SageTerminalInteractiveShell object>,), **kwargs={})
546 ....: if work:
547 ....: return 'foo worked'
548 ....: raise RuntimeError("foo didn't work")
549 sage: foo(False)
550 Traceback (most recent call last):
551 ...
552 RuntimeError: foo didn't work
553 sage: foo(True)
554 'foo worked'
555 sage: foo(False)
556 sage: foo(True)
557 """
558 @wraps(func)
559 def wrapper(*args, **kwargs):
560 if not wrapper.has_run:
--> 561 result = func(*args, **kwargs)
result = undefined
global func = undefined
args = (<sage.repl.interpreter.SageTerminalInteractiveShell object at 0x7fe0bd3efa10>,)
kwargs = {}
562 wrapper.has_run = True
563 return result
564 wrapper.has_run = False
565 return wrapper
566
567
568 @run_once
569 def load_ipython_extension(ip):
570 """
571 Load the extension in IPython.
572 """
573 # this modifies ip
574 SageCustomizations(shell=ip)
/home/wn/Documents/SageMath/local/lib/python2.7/site-packages/sage/repl/ipython_extension.pyc in load_ipython_extension(ip=<sage.repl.interpreter.SageTerminalInteractiveShell object>)
559 def wrapper(*args, **kwargs):
560 if not wrapper.has_run:
561 result = func(*args, **kwargs)
562 wrapper.has_run = True
563 return result
564 wrapper.has_run = False
565 return wrapper
566
567
568 @run_once
569 def load_ipython_extension(ip):
570 """
571 Load the extension in IPython.
572 """
573 # this modifies ip
--> 574 SageCustomizations(shell=ip)
global SageCustomizations = <class 'sage.repl.ipython_extension.SageCustomizations'>
global shell = undefined
ip = <sage.repl.interpreter.SageTerminalInteractiveShell object at 0x7fe0bd3efa10>
/home/wn/Documents/SageMath/local/lib/python2.7/site-packages/sage/repl/ipython_extension.pyc in __init__(self=<sage.repl.ipython_extension.SageCustomizations object>, shell=<sage.repl.interpreter.SageTerminalInteractiveShell object>)
417 def __init__(self, shell=None):
418 """
419 Initialize the Sage plugin.
420 """
421 self.shell = shell
422
423 self.auto_magics = SageMagics(shell)
424 self.shell.register_magics(self.auto_magics)
425
426 import sage.misc.edit_module as edit_module
427 self.shell.set_hook('editor', edit_module.edit_devel)
428
429 self.init_inspector()
430 self.init_line_transforms()
431
--> 432 import sage.all # until sage's import hell is fixed
sage.all = undefined
433
434 self.shell.verbose_quit = True
435 self.set_quit_hook()
436
437 self.register_interface_magics()
438
439 if SAGE_IMPORTALL == 'yes':
440 self.init_environment()
441
442 def register_interface_magics(self):
443 """
444 Register magics for each of the Sage interfaces
445 """
446 from sage.repl.interface_magic import InterfaceMagic
447 InterfaceMagic.register_all(self.shell)
/home/wn/Documents/SageMath/local/lib/python2.7/site-packages/sage/all.py in <module>()
72
73 # Add SAGE_SRC at the end of sys.path to enable Cython tracebacks
74 # (which use paths relative to SAGE_SRC)
75 sys.path.append(SAGE_SRC)
76
77
78 ###################################################################
79
80 # This import also setups the interrupt handler
81 from cysignals.signals import (AlarmInterrupt, SignalError,
82 sig_on_reset as sig_on_count)
83
84 from time import sleep
85
86 import sage.misc.lazy_import
---> 87 from sage.misc.all import * # takes a while
global sage.misc.all = undefined
88 from sage.typeset.all import *
89 from sage.repl.all import *
90
91 from sage.misc.sh import sh
92
93 from sage.libs.all import *
94 from sage.data_structures.all import *
95 from sage.doctest.all import *
96
97 from sage.structure.all import *
98 from sage.rings.all import *
99 from sage.arith.all import *
100 from sage.matrix.all import *
101
102 from sage.symbolic.all import *
/home/wn/Documents/SageMath/local/lib/python2.7/site-packages/sage/misc/all.py in <module>()
69
70 from .defaults import (set_default_variable_name,
71 series_precision, set_series_precision)
72
73 from .sage_eval import sage_eval, sageobj
74
75 from .sage_input import sage_input
76
77 lazy_import("sage.misc.cython", ["cython_lambda", "cython_create_local_so"])
78 lazy_import("sage.misc.cython_c", "cython_compile", "cython")
79
80 from .persist import save, load, dumps, loads, db, db_save
81
82 from .func_persist import func_persist
83
---> 84 from .functional import (additive_order,
global functional = undefined
global additive_order = undefined
global base_ring = undefined
global base_field = undefined
global basis = undefined
global category = undefined
global charpoly = undefined
global characteristic_polynomial = undefined
global coerce = undefined
global cyclotomic_polynomial = undefined
global decomposition = undefined
global denominator = undefined
global det = undefined
global dimension = undefined
global dim = undefined
global discriminant = undefined
global disc = undefined
global eta = undefined
global fcp = undefined
global gen = undefined
global gens = undefined
global hecke_operator = undefined
global image = undefined
global integral = undefined
global integrate = undefined
global integral_closure = undefined
global interval = undefined
global xinterval = undefined
global is_commutative = undefined
global is_even = undefined
global is_integrally_closed = undefined
global is_field = undefined
global is_odd = undefined
global kernel = undefined
global krull_dimension = undefined
global lift = undefined
global log = undefined
global log_b = undefined
global minimal_polynomial = undefined
global minpoly = undefined
global multiplicative_order = undefined
global ngens = undefined
global norm = undefined
global numerator = undefined
global numerical_approx = undefined
global n = undefined
global N = undefined
global objgens = undefined
global objgen = undefined
global order = undefined
global rank = undefined
global regulator = undefined
global round = undefined
global quotient = undefined
global quo = undefined
global isqrt = undefined
global squarefree_part = undefined
global symbolic_sum = undefined
global sum = undefined
global symbolic_prod = undefined
global product = undefined
global transpose = undefined
85 base_ring,
86 base_field,
87 basis,
88 category,
89 charpoly,
90 characteristic_polynomial,
91 coerce,
92 cyclotomic_polynomial,
93 decomposition,
94 denominator,
95 det,
96 dimension,
97 dim,
98 discriminant,
99 disc,
/home/wn/Documents/SageMath/local/lib/python2.7/site-packages/sage/misc/functional.py in <module>()
17 #
18 # This program is free software: you can redistribute it and/or modify
19 # it under the terms of the GNU General Public License as published by
20 # the Free Software Foundation, either version 2 of the License, or
21 # (at your option) any later version.
22 # http://www.gnu.org/licenses/
23 #*****************************************************************************
24 from __future__ import absolute_import
25 from six.moves import range, builtins
26 from six import integer_types
27
28 import sage.misc.latex
29 import sage.interfaces.expect
30 import sage.interfaces.mathematica
31
---> 32 from sage.rings.complex_double import CDF
global sage.rings.complex_double = undefined
global CDF = undefined
33 from sage.rings.real_double import RDF, RealDoubleElement
34
35 import sage.rings.real_mpfr
36 import sage.rings.complex_field
37 import sage.rings.integer
38
39 ##############################################################################
40 # There are many functions on elements of a ring, which mathematicians
41 # usually write f(x), e.g., it is weird to write x.log() and natural
42 # to write log(x). The functions below allow for the more familiar syntax.
43 ##############################################################################
44 def additive_order(x):
45 """
46 Returns the additive order of `x`.
47
ImportError: libgfortran.so.3: cannot open shared object file: No such file or directory
***************************************************************************
History of session input:
*** Last line of input (may not be in above history):
The community experience would be enriched with the addition of a Internet Relay Chat . I would be really glad if someone would guide me to build a IRC for the sage community.
i have a weird issue where sage crashes on one machine and not on another one even thought they have the same version of OS.
i installed the gdb for more report, please see attached.
sage_report.txt
I build sage 8.2 from source. using gcc 7.3.0 compiler. [I'm using ubuntu 18.04 LTS]
When I test my sage I got "sage -t --warn-long 25.2 src/sage/repl/image.py # Killed due to segmentation fault" message.
How can I solve it?
Thank you.
ps. when I test image.py manually this error only occurs when I test below example.
EXAMPLES::
sage: from sage.repl.image import Image
sage: img = Image('1', (16, 16), 'white')
sage: from sage.repl.rich_output import get_display_manager
sage: dm = get_display_manager()
sage: img._rich_repr_(dm)
OutputImagePng container
sage: img = Image('F', (16, 16), 'white') # not supported in PNG
sage: img._rich_repr_(dm) #This causes sagementation fault
OutputImageGif container
Here is my log file.
crash_At5_GT.log
see the subject :)
Patching the mpfr sources fails. This is weird because there should be no patches, right?
The stats.mode(v) function gives result not complying to documentation when given the list
[0, 2, 7, 7, 13, 20, 2, 13].
The doctsring specifies
Return the mode of
v. The mode is the sorted list of the most
frequently occuring elements inv. Ifnis the most times
that any element occurs inv, then the mode is the sorted list
of elements ofvthat occurntimes.
sage: mode([0, 2, 7, 7, 13, 20, 2, 13])
[2,13,7]This list returned in this instance is not sorted and therefore mode(v) does not meet specification.
I am trying to upgrade my sage-5.9.rc0 to sage-5.10.beta1. However the upgrade is stuck at a command for over 5 minutes: /usr/bin/python2.7 /usr/bin/hg id -i .. First of all, why is it not using the (already present) python from sage and secondly, why is it stuck in that?
Doing that exact command manually in the python2.7.4 build directory exits immediately when run outside the sage shell. But when it is run inside the sage shell, it is stuck just as in the build.
Attached screenshot might help in seeing what I am seeing.
The conjugate from complex_var should not be removed by simplify. Can someone explain this behaviour to me?
var('real_var', domain='real')
var('complex_var', domain='complex')
print(simplify(conjugate(real_var)))
print(simplify(conjugate(complex_var)))Sage Version 5.11, Release Date: 2013-08-13
When i install Sage from source code, i encountered the following problem. I guess the reason is that I have installed a python 3.6.5 using anaconda and there is a conflict when make Sage. But i'm not sure. How can i solve this problem? Does anyone face with this issue.
The following is the errors logged in the log file.
python -E ./setup.py build
running build
running build_ext
Traceback (most recent call last):
File "./setup.py", line 2402, in
main()
File "./setup.py", line 2397, in main
"Tools/scripts/2to3", "Tools/scripts/pyvenv"]
File "/home/woshibutian/\udce4\udcb8\udc8b\udce8\udcbd\udcbd/sage-8.3/local/var/tmp/sage/build/python3-3.6.6/src/Lib/distutils/core.py", line 148, in setup
dist.run_commands()
File "/home/woshibutian/\udce4\udcb8\udc8b\udce8\udcbd\udcbd/sage-8.3/local/var/tmp/sage/build/python3-3.6.6/src/Lib/distutils/dist.py", line 955, in run_commands
self.run_command(cmd)
File "/home/woshibutian/\udce4\udcb8\udc8b\udce8\udcbd\udcbd/sage-8.3/local/var/tmp/sage/build/python3-3.6.6/src/Lib/distutils/dist.py", line 974, in run_command
cmd_obj.run()
File "/home/woshibutian/\udce4\udcb8\udc8b\udce8\udcbd\udcbd/sage-8.3/local/var/tmp/sage/build/python3-3.6.6/src/Lib/distutils/command/build.py", line 135, in run
self.run_command(cmd_name)
File "/home/woshibutian/\udce4\udcb8\udc8b\udce8\udcbd\udcbd/sage-8.3/local/var/tmp/sage/build/python3-3.6.6/src/Lib/distutils/cmd.py", line 313, in run_command
self.distribution.run_command(command)
File "/home/woshibutian/\udce4\udcb8\udc8b\udce8\udcbd\udcbd/sage-8.3/local/var/tmp/sage/build/python3-3.6.6/src/Lib/distutils/dist.py", line 974, in run_command
cmd_obj.run()
File "/home/woshibutian/\udce4\udcb8\udc8b\udce8\udcbd\udcbd/sage-8.3/local/var/tmp/sage/build/python3-3.6.6/src/Lib/distutils/command/build_ext.py", line 339, in run
self.build_extensions()
File "./setup.py", line 228, in build_extensions
missing = self.detect_modules()
File "./setup.py", line 764, in detect_modules
for ln in fp:
File "/home/woshibutian/\udce4\udcb8\udc8b\udce8\udcbd\udcbd/sage-8.3/local/var/tmp/sage/build/python3-3.6.6/src/Lib/encodings/ascii.py", line 26, in decode
return codecs.ascii_decode(input, self.errors)[0]
UnicodeDecodeError: 'ascii' codec can't decode byte 0xe4 in position 74: ordinal not in range(128)
Makefile:597: recipe for target 'sharedmods' failed
make[4]: *** [sharedmods] Error 1
make[4]: Leaving directory '/home/woshibutian/下载/sage-8.3/local/var/tmp/sage/build/python3-3.6.6/src'
Error building Python.
real 1m49.177s
user 1m39.165s
sys 0m9.991s
Error building package python3-3.6.6
Please email sage-devel (http://groups.google.com/group/sage-devel)
explaining the problem and including the log file
/home/woshibutian/下载/sage-8.3/logs/pkgs/python3-3.6.6.log
Describe your computer, operating system, etc.
If you want to try to fix the problem yourself, don't just cd to
/home/woshibutian/下载/sage-8.3/local/var/tmp/sage/build/python3-3.6.6 and type 'make' or whatever is appropriate.
Instead, the following commands setup all environment variables
correctly and load a subshell for you to debug the error:
(cd '/home/woshibutian/下载/sage-8.3/local/var/tmp/sage/build/python3-3.6.6' && '/home/woshibutian/下载/sage-8.3/sage' --sh)
When you are done debugging, you can type "exit" to leave the subshell.
Hello,
I am running an old Sage notebook (version 6.5) on a Redhat Linux 6 server. I do not have the admin password to log into the notebook. I would like to understand how to
I ran into the following problem when building the repository. Is this a known problem?
gcc -fno-strict-aliasing -g -O2 -DNDEBUG -g -fwrapv -O3 -Wall -fPIC -I/dev/shm/sage/local/include -Isage/libs/polybori -I/dev/shm/sage/local/include -I/dev/shm/sage/local/include/csage -I/dev/shm/sage/src -I/dev/shm/sage/src/sage/ext -I/dev/shm/sage/local/include -I/dev/shm/sage/local/include/csage -I/dev/shm/sage/src -I/dev/shm/sage/src/sage/ext -I/dev/shm/sage/local/include/python2.7 -c sage/rings/polynomial/pbori.cpp -o build/temp.linux-x86_64-2.7/sage/rings/polynomial/pbori.o -std=c99 -mmmx -msse -msse2 -msse3 -w -fno-tree-dominator-opto
In file included from /dev/shm/sage/local/include/polybori/pbori_defs.h:27:0,
from /dev/shm/sage/local/include/polybori/BoolePolyRing.h:21,
from /dev/shm/sage/local/include/polybori/BoolePolynomial.h:30,
from /dev/shm/sage/local/include/csage/pb_wrap.h:2,
from sage/rings/polynomial/pbori.cpp:314:
/dev/shm/sage/local/include/polybori/cudd/cudd.h:74:29: fatal error: polybori/config.h: No such file or directory
#include <polybori/config.h>
^
compilation terminated.
error: command 'gcc' failed with exit status 1
Could the person who set up zenodo for sagemath please step forward and either remove it from zenodo, or, better fix it so that it works again (the easiest might be to deactivate/activate it).
Unfortunately zenodo does not allow "repo team members" to change the repo settings, it must be done by the same person who set it up.
SageMath version 7.6
for example, I have this in file x.sage:
#!/usr/bin/sage
fx(x)=piecewise([[(-1,2),2*x+4], \
[(2,4), 2*x^2-4*x]])
but sage x.sage send error like this
File "x.sage.py", line 7
__tmp__=var("x"); fx = symbolic_expression(piecewise([[(-_sage_const_1 ,_sage_const_2 ),_sage_const_2 *x+_sage_const_4 ], * BackslashOperator() * ).function(x)
^
SyntaxError: invalid syntax
while I can just copy the code and paste in the sage shell, it works of course.
but for the script, I have no way to make it work, the preparser only deal with a single line and don't know the line continue mark.
And I'm extremely wondering why the script doesn't work like just paste the content line by line to the sage shell, it's called sage script but it doesn't works like a script.
This can be done just by parsing the original line to the sage shell, which also makes it for sure that the script works really like a script.
Could we rename the "working" branch to be called "master" again? The dev scripts assume that the main branch is called master and I believe that this is what most people expect.
I have to admit that I do not understand what the master branch is currently...
configure: error: could not find a working compiler, see config.log for details
Error configuring MPIR (with CFLAGS unset).
Consult /Users/getchell/sage/local/var/tmp/sage/build/mpir-2.6.0.p2/src/config.log for for details.
real 0m1.975s
user 0m0.355s
sys 0m0.398s
Error installing package mpir-2.6.0.p2
Please email sage-devel (http://groups.google.com/group/sage-devel)
explaining the problem and including the relevant part of the log file
/Users/getchell/sage/logs/pkgs/mpir-2.6.0.p2.log
Describe your computer, operating system, etc.
If you want to try to fix the problem yourself, don't just cd to
/Users/getchell/sage/local/var/tmp/sage/build/mpir-2.6.0.p2 and type 'make' or whatever is appropriate.
Instead, the following commands setup all environment variables
correctly and load a subshell for you to debug the error:
(cd '/Users/getchell/sage/local/var/tmp/sage/build/mpir-2.6.0.p2' && '/Users/getchell/sage/sage' --sh)
When you are done debugging, you can type "exit" to leave the subshell.
make[2]: *** [/Users/getchell/sage/local/var/lib/sage/installed/mpir-2.6.0.p2] Error 1
make[1]: *** [all] Error 2
real 0m34.244s
user 0m8.538s
sys 0m5.590s
Error building Sage.
The following package(s) may have failed to build:
package: mpir-2.6.0.p2
log file: /Users/getchell/sage/logs/pkgs/mpir-2.6.0.p2.log
build directory: /Users/getchell/sage/local/var/tmp/sage/build/mpir-2.6.0.p2
The build directory may contain configuration files and other potentially
helpful information. WARNING: if you now run 'make' again, the build
directory will, by default, be deleted. Set the environment variable
SAGE_KEEP_BUILT_SPKGS to 'yes' to prevent this.
make: *** [build] Error 1
┌─[getchell][Hapkido][±][build_system ✓][~/sage]
└─▪ system_profiler SPSoftwareDataType
Software:
System Software Overview:
System Version: OS X 10.8.4 (12E55)
Kernel Version: Darwin 12.4.0
Boot Volume: Macintosh HD
Boot Mode: Normal
Computer Name: Hapkido
User Name: Getchell, Adam (getchell)
Secure Virtual Memory: Enabled
Time since boot: 14:06
┌─[getchell][Hapkido][±][build_system ✓][~/sage]
└─▪ gcc -v
Configured with: --prefix=/Applications/Xcode5-DP.app/Contents/Developer/usr --with-gxx-include-dir=/usr/include/c++/4.2.1
Apple LLVM version 5.0 (clang-500.1.58) (based on LLVM 3.3svn)
Target: x86_64-apple-darwin12.4.0
Thread model: posix
How to use sage to solve equations of variables which are variables of a polynomial ring?
Hi,
I have code on https://github.com/okazymyrov/sbox. It works fine with sage 7.1 . However, in SageMath 8.1 I get warnings like:
/Users/okazymyrov/bin/sage8.1/local/lib/python2.7/site-packages/sage/misc/cython.py:313: DeprecationWarning: the Sage-specific Cython pragma '#clang' is deprecated;
use '# distutils: language' instead
but the code is running. When I change # cfile /Users/okazymyrov/Downloads/sbox/C/CI.c
to # distutils: sources = /Users/okazymyrov/Downloads/sbox/C/CI.c
in Cython/CFunc.spyx I get the error
Compiling /Users/okazymyrov/Downloads/sbox/Sage/../Cython/CFunc.spyx...
/Users/okazymyrov/bin/sage8.1/local/lib/python2.7/site-packages/sage/misc/cython.py:322: DeprecationWarning: the Sage-specific Cython pragma '#cfile' is deprecated;
use '# distutils: sources' instead
See http://trac.sagemath.org/24105 for details.
additional_source_files, s = _parse_keywords('cfile', s)
Traceback (most recent call last):
File "./Main.sage.py", line 27, in <module>
load("./TestFunctions.sage")
File "sage/structure/sage_object.pyx", line 1057, in sage.structure.sage_object.load (build/cythonized/sage/structure/sage_object.c:12915)
File "/Users/okazymyrov/bin/sage8.1/local/lib/python2.7/site-packages/sage/repl/load.py", line 247, in load
exec(preparse_file(open(fpath).read()) + "\n", globals)
File "<string>", line 21, in <module>
File "sage/structure/sage_object.pyx", line 1057, in sage.structure.sage_object.load (build/cythonized/sage/structure/sage_object.c:12915)
File "/Users/okazymyrov/bin/sage8.1/local/lib/python2.7/site-packages/sage/repl/load.py", line 247, in load
exec(preparse_file(open(fpath).read()) + "\n", globals)
File "<string>", line 41, in <module>
File "sage/structure/sage_object.pyx", line 1057, in sage.structure.sage_object.load (build/cythonized/sage/structure/sage_object.c:12915)
File "/Users/okazymyrov/bin/sage8.1/local/lib/python2.7/site-packages/sage/repl/load.py", line 251, in load
exec(load_cython(fpath), globals)
File "<string>", line 1, in <module>
ImportError: dlopen(/Users/okazymyrov/.sage/temp/hamsin.local/37857/spyx/_Users_okazymyrov_Downloads_sbox_Cython_CFunc_spyx/_Users_okazymyrov_Downloads_sbox_Cython_CFunc_spyx_0.so, 2): Symbol not found: _CI
Referenced from: /Users/okazymyrov/.sage/temp/hamsin.local/37857/spyx/_Users_okazymyrov_Downloads_sbox_Cython_CFunc_spyx/_Users_okazymyrov_Downloads_sbox_Cython_CFunc_spyx_0.so
Expected in: flat namespace
in /Users/okazymyrov/.sage/temp/hamsin.local/37857/spyx/_Users_okazymyrov_Downloads_sbox_Cython_CFunc_spyx/_Users_okazymyrov_Downloads_sbox_Cython_CFunc_spyx_0.so
The load sequence is the following:
System info:
bash-3.2$ sage --version
SageMath version 8.1, Release Date: 2017-12-07
bash-3.2$ uname -a
Darwin hamsin.local 17.5.0 Darwin Kernel Version 17.5.0: Mon Mar 5 22:24:32 PST 2018; root:xnu-4570.51.1~1/RELEASE_X86_64 x86_64
Might be a bug in the Cython parse class?
Kind regards,
Oleksandr
I have parsed about 15k generating functions of the OEIS sequences and as a use case, generated about 300 million relations. It would be great if we could include the generating functions (and maybe even the relations) in the OEIS module. I can provide the gf and relations in a suitable format (e.g Content-MathML).
(Putting bug report here for now until Trac is back up)
While building the docs I got this traceback:
[developer] /home/embray/src/sagemath/sage/src/doc/en/developer/coding_in_other.rst:160: WARNING: duplicate label section-gap, other instance in /home/embray/src/sagemath/sage/src/doc/en/developer/interfaces.rst
Error building the documentation.
Traceback (most recent call last):
File "/home/embray/src/sagemath/sage/local/lib/python2.7/runpy.py", line 162, in _run_module_as_main
"__main__", fname, loader, pkg_name)
File "/home/embray/src/sagemath/sage/local/lib/python2.7/runpy.py", line 72, in _run_code
exec code in run_globals
File "/home/embray/src/sagemath/sage/local/lib/python2.7/site-packages/sage_setup/docbuild/__main__.py", line 2, in <module>
main()
File "/home/embray/src/sagemath/sage/local/lib/python2.7/site-packages/sage_setup/docbuild/__init__.py", line 1637, in main
builder()
File "/home/embray/src/sagemath/sage/local/lib/python2.7/site-packages/sage_setup/docbuild/__init__.py", line 320, in _wrapper
map_parallel(build_other_doc, L)
File "/home/embray/src/sagemath/sage/local/lib/python2.7/site-packages/sage_setup/docbuild/__init__.py", line 142, in map_parallel
return map(func, args)
File "/home/embray/src/sagemath/sage/local/lib/python2.7/site-packages/sage_setup/docbuild/__init__.py", line 280, in build_other_doc
getattr(get_builder(document), name)(*args, **kwds)
File "/home/embray/src/sagemath/sage/local/lib/python2.7/site-packages/sage_setup/docbuild/__init__.py", line 103, in f
runsphinx()
File "/home/embray/src/sagemath/sage/local/lib/python2.7/site-packages/sage_setup/docbuild/sphinxbuild.py", line 215, in runsphinx
raise exception
OSError: [developer] /home/embray/src/sagemath/sage/src/doc/en/developer/coding_in_other.rst:160: WARNING: duplicate label section-gap, other instance in /home/embray/src/sagemath/sage/src/doc/en/developer/interfaces.rst
Ok so there's a duplicate label, that's clear enough, and should be fixed. The odd part is just
other instance in /home/embray/src/sagemath/sage/src/doc/en/developer/interfaces.rst
But there is no src/doc/env/developer/interfaces.rst. The file it seems to be referring to is in src/doc/en/tutorials/. I haven't checked whether this is a Sage specific error or something general to Sphinx (looks like maybe the latter). It's probably just a formatting error in the error message, but confusing all the same!
@sagemath If this is not used as issue tracker, I think the issues feature should be disabled to avoid confussion
When configuring Sphinx for documenting a package, it's in principle very easy to enable cross links to the Sage documentation, with:
intersphinx_mapping = {'https://docs.python.org/': None,
'https://doc.sagemath.org/html/en/reference/': None}
That's a nice feature that packages built on top of Sage will want to exploit.
However, upon make html, I get:
WARNING: intersphinx inventory 'https://doc.sagemath.org/html/en/reference/objects.inv' not fetchable due to <class 'urllib2.HTTPError'>: HTTP Error 403: Forbidden
even though the file can be downloaded with e.g. wget.
I assume that the user agent "Python-urlib2" is considered by default as being a robot. Would it be possible to configure robots.txt to accept calls from urllib2 or just enable any user agent to retrieve objects.inv?
An alternative would be to dig in Sphinx's code and set a different user agent. I haven't quite yet managed to do that. But in any cases, this adds a piece of burden to package writers.
cc: @haraldschilly
Someting must have gone wrong in the conversion script; I get:
./spkg-install: line 182: ../patches/graph.c.patch: No such file or directory
when building cliquer
hello,
with version 8.0 of sagemath/sagemath image docker, i detect all my cpus:
$ docker run -it --rm sagemath/sagemath:8.0 sage
SageMath version 8.0, Release Date: 2017-07-21
Forcing sage-location, probably because a new package was installed.
Updating various hardcoded paths...
(Please wait at most a few minutes.)
DO NOT INTERRUPT THIS.
Done updating paths.
sage: sage.parallel.ncpus.ncpus()
8
with version 8.1 and latest i detect only one cpu:
docker run -it --rm sagemath/sagemath:latest sage
┌───────────────────────────────────────────────────────────────┐
│ SageMath version 8.2, Release Date: 2018-05-05 │
│ Type "notebook()" for the browser-based notebook interface. │
│ Type "help()" for help. │
└───────────────────────────────────────────────────────────────┘
Setting permissions of DOT_SAGE directory so only you can read and write it.
sage: sage.parallel.ncpus.ncpus()
1
and if i launch "nproc" in container i have all my cpus:
docker run -it --rm sagemath/sagemath:latest nproc
8
Can you help me , please
~$ sage
┌────────────────────────────────────────────────────────────────────┐
│ SageMath version 9.0, Release Date: 2020-01-01 │
│ Using Python 3.8.6. Type "help()" for help. │
└────────────────────────────────────────────────────────────────────┘
Traceback (most recent call last):
File "/usr/share/sagemath/bin/sage-ipython", line 12, in
from sage.repl.interpreter import SageTerminalApp
File "/usr/lib/python3/dist-packages/sage/repl/interpreter.py", line 105, in
from sage.repl.preparse import preparse, containing_block
File "/usr/lib/python3/dist-packages/sage/repl/preparse.py", line 227, in
from sage.repl.load import load_wrap
File "/usr/lib/python3/dist-packages/sage/repl/load.py", line 19, in
from sage.cpython.string import str_to_bytes, bytes_to_str, FS_ENCODING
ModuleNotFoundError: No module named 'sage.cpython.string'
~$ uname -a
Linux lhw 5.8.0-19-generic #20-Ubuntu SMP Fri Sep 11 09:08:26 UTC 2020 x86_64 x86_64 x86_64 GNU/Linux
~$
I recently started using Sagemath and I noticed this behavior:
>>> a1=var('a_1')
>>> E=x^a1
>>> E(a1=1)
a₁
x
>>> E(a_1=1)
x
Should this be the behavior? I feel like this is a bug and the correct way would be to indeed use E(a1=1) because that is the name of the variable, while a_1 is just its representation. For example, if I use Sympy's syntax it works as it should:
>>> E.subs({a1:1})
x
I'm using SageMath version 7.5.1 compiled for Linux Mint 18.1.
Hello,
SAGE VERSION: SageMath version 8.0, Release Date: 2017-07-21
I am trying to understand how XOR works in Sage because it not conform to the logic table:
print 0 ^ 0, 0 ^ 1 , 1 ^ 0, 1 ^ 1
results in 1 0 1 1
but
print (0 + 0) %2, (0 + 1) %2, (1 + 0) %2, (1 + 1) %2
results in 0 1 1 0
And XOR is addition mod 2, so I am not sure what is going on.
I also tried making everything python ints:
print int(0) ^ int(0), int(0) ^ int(1) , int(1) ^ int(0), int(1) ^ int(1)
But I still get 1 0 1 1
The only way I have been able to get the result I expect is by:
import operator
operator.xor(0, 0), operator.xor(0, 1), operator.xor(1, 0), operator.xor(1, 1)
Thank you!
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