saezlab Goto Github PK
Name: Saez Lab
Type: Organization
Bio: Institute for Computational Biomedicine - Julio Saez-Rodriguez's group
Location: Germany
Blog: saezlab.org
Name: Saez Lab
Type: Organization
Bio: Institute for Computational Biomedicine - Julio Saez-Rodriguez's group
Location: Germany
Blog: saezlab.org
CellNOptR add-on that permits to extend a network with links derived from literature
CellNOptR extension using constrained fuzzy logic
add-on for CellNOptR using logic based differential equations
modified version of CNORode including: steady state penalty, L1 regularisation, bootstrap, new transfer function
Probabilistic logic version of CellNOpt (derived from FALCON)
Main repository for the new CellNOpt features (CNOv2)
Neural Logic ODEs for Cell Signaling Inference with JAX
Gene regulatory network containing signed transcription factor-target gene interactions
Analysis code for Combi-Seq paper
combiMS code for Prediction of combination therapy based on perturbation modeling of the multiple sclerosis signaling network. Code started by Marti at EBI on Feb 2013
Conformationomic dataset (+phospho) of yeast osmotic stress to explore possibilities with this type of data.
Transfer of regulatory knowledge from human to mouse for functional genomics analysis
CORNETO: A Unified Omics-Driven Framework for Network Inference
new lighter and streamlined PKN generation, based on redHuman reaction network
code for the COSMOS study in MSB
COSMOS (Causal Oriented Search of Multi-Omic Space) is a method that integrates phosphoproteomics, transcriptomics, and metabolomics data sets.
We use our tools to analysis Covid19 RNAseq datasets
Analysis of Phosphoproteomics/Transcriptomics datasets related to SARS-CoV-2 infection
Functional analysis of Liver samples from COVID patients
Saezlab tools on Intestinal organoids treated with Sars-CoV-2 for 60 hours
Supplementary material for CPT tutorial on logic modeling for quantitative systems pharmacology
Cell-type specific parameters of signalling pathway models as biomarkers for drug sensitivity
CRCDiet
Bridging Cytoscape with R
CellNOptR in Cytoscape
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.