Comments (6)
Hi ofleitas,
I need some more information to figure out what's going on.
How many samples and features are in your input?
Are you using phyloseq as input or a data.frame?
from datest.
from datest.
I looks like your predictor variable is wrong. The output says ct1, ct2, ct3, rst1, rst2, rst3. Your predictor should have the same value for all controls and same value for all treatments. Else it looks like there are six conditions with only 1 sample in each
from datest.
from datest.
I don't have an example, unfortunately. But in your case it could be predictor = c("ct", "ct", "ct", "rst", "rst", "rst"), if that matches the order of the columns in the input data.frame.
from datest.
from datest.
Related Issues (20)
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from datest.