A custom library to handle protein sequence and structure
###Includes functions to
- Handle protein seqeunce and structures
- Read Gromacs analysis output files
- Developing a primitive bead model to represent chemical molecules
- Organize and clean
- Make it coherent - similar dependencies, variable names and syntax, Add cross-references
- Bead model - correct and develop
- Adapt beads to peptides - non-linear - use graphs and simplify topology represenation