Name: Jeffrey Ross-Ibarra
Type: User
Company: UC Davis
Blog: rilab.github.io
I'm currently working on estimating recent demography in maize (and maybe some other crops if I can get things working. Check out other ongoings at the lab webpage or the lab github including for example ideas on how to use your <censored> bp.
You can also find me twittering around. But I'm not a cool cow from 1994, and I won't tell you what R.E.H.A.B. stands for, so don't ask.
maize_origins
maize_relate
maize_v4_te_annotation
scripts and intermediate files used to annotate TEs in Jiao et al.
mcmcbc
methylation SFS MCMC
mlhka
slightly modified version of Stephen Wright's MLHKA
msnsam
Hudson's ms with variable sample size across loci
msreject
rejection sampling from ms
msstats
Calculate summary stats from Hudson's ms
msstats-1
msstats calculates many common popgen summary statistics from the output of the coalescent simulation "ms".
msstatsfst
addition of Fst statistic to msstats
nsf-deb-introgression
NSF grant on introgression/hbyridization in maize/teosinte
panandbib
Annotated bibliography for RILAB panand project
patternfinder
triplet and quadruplet patterns for recombination
pbgso.github.io
The Plant Breeding Graduate Student Organization at UCD
pdf2pdf
does the magical pdf-to-pdf conversion popular in academic journal submission sites
perl_buffet
one-off perl scripts galore
pgrp15
NSF PGRP 2015 highland adaptation
phasing_tests
plantgenomesonline.github.io
Plant Genomes Online meeting
pol4
popgen-notes
Population genetics notes
progenyarray
An R package to work with half-sib progeny array data
quality_control
quality control pipeline for new sequence lanes
r_buffet
A veritable smorgasboard of (bad) r code
rare_alleles_imputation
rcode4teaching
R code that I use for teaching and illustration of population genetic concepts.
references
bibtex for the win!
riplasm
germplasm
rossibarra
rossibarra.github.io
test new website
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
Django
The Web framework for perfectionists with deadlines.
Laravel
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
Microsoft
Open source projects and samples from Microsoft.
Google
Google ❤️ Open Source for everyone.
Alibaba
Alibaba Open Source for everyone
D3
Data-Driven Documents codes.
Tencent
China tencent open source team.
