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An integrative workflow to extract single images from flow citometry files and create multichannel ome.tiff images

License: MIT License

R 10.28% Python 25.84% Jupyter Notebook 63.88%
flowcytometry omero python rdm

2024_flowcitometry_multichannel's Introduction

Hej you! Hi there ๐Ÿ‘‹

My name is Riccardo, I am from Italy, living in Leipzig since 2012 and currently working in UFZ. I am actively working in the field of data management and FAIR data.

In the last years, I worked with the analysis of image objects using python. I am also occasionally working on the analysis and visualization of behavioural datasets collected from danio rerio larvae and gammarus pulex using automatic tracking systems.

I have long term experience in building user-friendly workflows to increase reproducibily in life science and allows people with no experience in coding to run their own ideas or analysis workflows. I am also a freelancer teacher of KNIME and OMERO in my working instution.

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