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Scripts and resources for analyzing sequence data for select eco-functional genes
Is the FunGene website (http://fungene.cme.msu.edu) still being maintained? There might be a lot of change of personnel in RDP but it will be so sad if FunGene is down permanently.
I might be missing something, but are these scripts for analyzing sequencing files individually? If so is there a wrapper to join all the sample results together to perform multi-sample community analysis as per MOTHUR or QIIME?
How can I get an update of the files in the resources directory? As far as I can see the files over there are not updated when there is a new release of fungene after a NCBI update. Is it possible to get the files synchronized with the Fungene 8.7 release?
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