ravinderbhattoo / peridyn Goto Github PK

Hi Ravinder ,
I am having a problem with the "test" of PeriDyn (Thanks for the Julia version):
_
_ _ ()_ | Documentation: https://docs.julialang.org
() | () () |
_ _ | | __ _ | Type "?" for help, "]?" for Pkg help.
| | | | | | |/ ` | |
| | || | | | (| | | Version 1.6.2 (2021-07-14)
/ |_'|||_'_| | Official https://julialang.org/ release
|__/ |

(@v1.6) pkg> test PeriDyn
Testing PeriDyn
Status /tmp/jl_FvpQOz/Project.toml
[699b3a5d] PDMesh v0.1.0 https://github.com/ravinderbhattoo/PDMesh#main
[c3db0ce0] PeriDyn v0.1.0 https://github.com/ravinderbhattoo/PeriDyn#master
[295af30f] Revise v3.1.19
...
[8e850ede] nghttp2_jll @stdlib/nghttp2_jll
[3f19e933] p7zip_jll @stdlib/p7zip_jll
Precompiling project...
✗ PeriDyn
0 dependencies successfully precompiled in 8 seconds (11 already precompiled)
1 dependency errored. To see a full report either run import Pkg; Pkg.precompile() or load the package
Testing Running tests...
ERROR: LoadError: ArgumentError: Package PeriDyn does not have LinearAlgebra in its dependencies:

• If you have PeriDyn checked out for development and have
  added LinearAlgebra as a dependency but haven't updated your primary
  environment's manifest file, try Pkg.resolve().
• Otherwise you may need to report an issue with PeriDyn
  Stacktrace:
  [1] require(into::Module, mod::Symbol)
  @ Base ./loading.jl:906
  [2] include
  @ ./Base.jl:386 [inlined]
  [3] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt64}}, source::String)
  @ Base ./loading.jl:1235
  [4] top-level scope
  @ none:1
  [5] eval
  @ ./boot.jl:360 [inlined]
  [6] eval(x::Expr)
  @ Base.MainInclude ./client.jl:446
  [7] top-level scope
  @ none:1
  in expression starting at /home/carol/.julia/packages/PeriDyn/6Dx8g/src/PeriDyn.jl:1

I entered each line one by one. The error occurred at:
...
julia> quasi_static!([env],Steps,10.0,filewrite_freq=1,neigh_update_freq=1,file_prefix="minimize",start_at=0)

Writting data file................................Done

Updating neighbors for collision..................Average repulsive neighs: 0.0
Initial state saved.Minimizing...
Tolerance reached. 0.0 <= 1.0e-6 or 0.0 <= 1.0e-6
ERROR: MethodError: no method matching (::var"#1#2")(::PeriDyn.GeneralEnv, ::Int64)
Closest candidates are:
(::var"#1#2")(::Any, ::Any, ::Any) at REPL[24]:1
Stacktrace:
[1] quasi_static!(envs::Vector{PeriDyn.GeneralEnv}, N::Int64, step_size::Float64; max_iter::Int64, filewrite_freq::Int64, neigh_update_freq::Int64, file_prefix::String, start_at::Int64)
@ PeriDyn ~/.julia/packages/PeriDyn/6Dx8g/src/solvers.jl:208
[2] top-level scope
@ REPL[25]:1