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Ben's Projects

knitrbootstrap icon knitrbootstrap

A framework to create bootstrap styled HTML reports from knitr Rmarkdown.

labs icon labs

Scripts for PH525x: Data Analysis for Genomics

leetcode icon leetcode

:pencil: Python / C++ 11 Solutions of All LeetCode Questions

ludwig icon ludwig

Ludwig is a toolbox built on top of TensorFlow that allows to train and test deep learning models without the need to write code.

metabolomics icon metabolomics

Course Data Repository for "Bioinformatics: Introduction to Metabolomics"

microbemiseq icon microbemiseq

Set of useful functions and scripts for analyzing amplicon Miseq data.

mlclass icon mlclass

Python code for Machine Learning course from Coursera

msd1000 icon msd1000

Visualization of the microbiome of children from low-income countries

navasetal icon navasetal

R markdown supplementary files for navas et al

ngopt icon ngopt

Automatically exported from code.google.com/p/ngopt

ngs-pipeline icon ngs-pipeline

By study this, it won't be costly or time-consuming to customize a NGS data analysis pipeline

phyloseq icon phyloseq

phyloseq is a set of classes, wrappers, and tools (in R) to make it easier to import, store, and analyze phylogenetic sequencing data; and to reproducibly share that data and analysis with others. See the phyloseq front page:

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