pi@raspberrypi:~ $ R CMD config --all
CC = gcc -std=gnu99
CFLAGS = -g -O2 -fdebug-prefix-map=/root/git/r-backports/stretch/r-base-3.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g
CPICFLAGS = -fpic
CPP = gcc -std=gnu99 -E
CPPFLAGS =
CXX = g++
CXXCPP = g++ -E
CXXFLAGS = -g -O2 -fdebug-prefix-map=/root/git/r-backports/stretch/r-base-3.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g
CXXPICFLAGS = -fpic
CXX11 = g++
CXX11STD = -std=gnu++11
CXX11FLAGS = -g -O2 -fdebug-prefix-map=/root/git/r-backports/stretch/r-base-3.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g
CXX11PICFLAGS = -fpic
CXX14 = g++
CXX14STD = -std=gnu++14
CXX14FLAGS = -g -O2 -fdebug-prefix-map=/root/git/r-backports/stretch/r-base-3.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g
CXX14PICFLAGS = -fpic
CXX98 = g++
CXX98STD = -std=gnu++98
CXX98FLAGS = -g -O2 -fdebug-prefix-map=/root/git/r-backports/stretch/r-base-3.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g
CXX98PICFLAGS = -fpic
CXX17 =
CXX17STD =
CXX17FLAGS =
CXX17PICFLAGS =
CXX1X = g++
CXX1XSTD = -std=gnu++11
CXX1XFLAGS = -g -O2 -fdebug-prefix-map=/root/git/r-backports/stretch/r-base-3.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g
CXX1XPICFLAGS = -fpic
DYLIB_EXT = .so
DYLIB_LD = gcc -std=gnu99
DYLIB_LDFLAGS = -shared -fopenmp
F77 = gfortran
FFLAGS = -g -O2 -fdebug-prefix-map=/root/git/r-backports/stretch/r-base-3.5.1=. -fstack-protector-strong
FPICFLAGS = -fpic
FLIBS = -lgfortran -lm
SAFE_FFLAGS = -g -O2 -fdebug-prefix-map=/root/git/r-backports/stretch/r-base-3.5.1=. -fstack-protector-strong
FC = gfortran
FCFLAGS = -g -O2 -fdebug-prefix-map=/root/git/r-backports/stretch/r-base-3.5.1=. -fstack-protector-strong
FCPICFLAGS = -fpic
OBJC =
OBJCFLAGS =
JAVA = /usr/lib/jvm/default-java/jre/bin/java
JAVAC = /usr/lib/jvm/default-java/bin/javac
JAVAH = /usr/lib/jvm/default-java/bin/javah
JAR = /usr/lib/jvm/default-java/bin/jar
JAVA_HOME = /usr/lib/jvm/default-java
JAVA_LIBS = -L/usr/lib/jvm/default-java/jre/lib/arm/client -ljvm
JAVA_CPPFLAGS = -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux
LDFLAGS = -Wl,-z,relro
SHLIB_CFLAGS =
SHLIB_CXXLD = g++
SHLIB_CXXLDFLAGS = -shared
SHLIB_CXX98LD = g++ -std=gnu++98
SHLIB_CXX98LDFLAGS = -shared
SHLIB_CXX11LD = g++ -std=gnu++11
SHLIB_CXX11LDFLAGS = -shared
SHLIB_CXX14LD = g++ -std=gnu++14
SHLIB_CXX14LDFLAGS = -shared
SHLIB_CXX17LD =
SHLIB_CXX17LDFLAGS = -shared
SHLIB_EXT = .so
SHLIB_FFLAGS =
SHLIB_LD = gcc -std=gnu99
SHLIB_LDFLAGS = -shared
SHLIB_FCLD = gfortran
SHLIB_FCLDFLAGS = -shared
SHLIB_CXX1XLD = g++ -std=gnu++11
SHLIB_CXX1XLDFLAGS = -shared
TCLTK_CPPFLAGS = -I/usr/include/tcl8.6 -I/usr/include/tcl8.6
TCLTK_LIBS = -L/usr/lib/arm-linux-gnueabihf -ltcl8.6 -L/usr/lib/arm-linux-gnueabihf -ltk8.6 -lX11 -lXss -lXext
BLAS_LIBS = -lblas
LAPACK_LIBS = -llapack
MAKE = make
LIBnn = lib
LOCAL_SOFT =
COMPILED_BY =
pi@raspberrypi:~ $ git clone https://github.com/rstudio/httpuv.git
Cloning into 'httpuv'...
remote: Enumerating objects: 447, done.
remote: Counting objects: 100% (447/447), done.
remote: Compressing objects: 100% (308/308), done.
remote: Total 3791 (delta 191), reused 222 (delta 136), pack-reused 3344
Receiving objects: 100% (3791/3791), 3.97 MiB | 2.68 MiB/s, done.
Resolving deltas: 100% (2147/2147), done.
pi@raspberrypi:~ $ sudo R CMD INSTALL httpuv
* installing to library ‘/usr/local/lib/R/site-library’
ERROR: dependencies ‘promises’, ‘later’ are not available for package ‘httpuv’
* removing ‘/usr/local/lib/R/site-library/httpuv’
pi@raspberrypi:~ $ git clone https://github.com/r-lib/later.git
Cloning into 'later'...
remote: Enumerating objects: 1, done.
remote: Counting objects: 100% (1/1), done.
remote: Total 790 (delta 0), reused 0 (delta 0), pack-reused 789
Receiving objects: 100% (790/790), 156.68 KiB | 0 bytes/s, done.
Resolving deltas: 100% (497/497), done.
pi@raspberrypi:~ $ sudo R CMD INSTALL later
* installing to library ‘/usr/local/lib/R/site-library’
* installing *source* package ‘later’ ...
Running configure script
Using CC=gcc -std=gnu99
Using CFLAGS=-g -O2 -fdebug-prefix-map=/root/git/r-backports/stretch/r-base-3.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g
Using CPPFLAGS=
C11-style threads.h support not detected. Using tinycthread library.
** libs
g++ -I"/usr/share/R/include" -DNDEBUG -pthread -DTHREADS_H_SUPPORT=-1 -I"/usr/local/lib/R/site-library/Rcpp/include" -I"/usr/local/lib/R/site-library/BH/include" -fpic -g -O2 -fdebug-prefix-map=/root/git/r-backports/stretch/r-base-3.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c RcppExports.cpp -o RcppExports.o
g++ -I"/usr/share/R/include" -DNDEBUG -pthread -DTHREADS_H_SUPPORT=-1 -I"/usr/local/lib/R/site-library/Rcpp/include" -I"/usr/local/lib/R/site-library/BH/include" -fpic -g -O2 -fdebug-prefix-map=/root/git/r-backports/stretch/r-base-3.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c callback_registry.cpp -o callback_registry.o
In file included from /usr/local/lib/R/site-library/BH/include/boost/bind/mem_fn.hpp:25:0,
from /usr/local/lib/R/site-library/BH/include/boost/mem_fn.hpp:22,
from /usr/local/lib/R/site-library/BH/include/boost/bind/bind.hpp:26,
from /usr/local/lib/R/site-library/BH/include/boost/bind.hpp:22,
from callback_registry.cpp:2:
/usr/local/lib/R/site-library/BH/include/boost/get_pointer.hpp:48:40: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
template<class T> T * get_pointer(std::auto_ptr<T> const& p)
^~~~~~~~
In file included from /usr/include/c++/6/memory:81:0,
from /usr/local/lib/R/site-library/BH/include/boost/config/no_tr1/memory.hpp:21,
from /usr/local/lib/R/site-library/BH/include/boost/get_pointer.hpp:14,
from /usr/local/lib/R/site-library/BH/include/boost/bind/mem_fn.hpp:25,
from /usr/local/lib/R/site-library/BH/include/boost/mem_fn.hpp:22,
from /usr/local/lib/R/site-library/BH/include/boost/bind/bind.hpp:26,
from /usr/local/lib/R/site-library/BH/include/boost/bind.hpp:22,
from callback_registry.cpp:2:
/usr/include/c++/6/bits/unique_ptr.h:49:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/local/lib/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:28:0,
from /usr/local/lib/R/site-library/BH/include/boost/shared_ptr.hpp:17,
from callback_registry.cpp:3:
/usr/local/lib/R/site-library/BH/include/boost/smart_ptr/detail/shared_count.hpp:355:33: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
explicit shared_count( std::auto_ptr<Y> & r ): pi_( new sp_counted_impl_p<Y>( r.get() ) )
^~~~~~~~
In file included from /usr/include/c++/6/memory:81:0,
from /usr/local/lib/R/site-library/BH/include/boost/config/no_tr1/memory.hpp:21,
from /usr/local/lib/R/site-library/BH/include/boost/get_pointer.hpp:14,
from /usr/local/lib/R/site-library/BH/include/boost/bind/mem_fn.hpp:25,
from /usr/local/lib/R/site-library/BH/include/boost/mem_fn.hpp:22,
from /usr/local/lib/R/site-library/BH/include/boost/bind/bind.hpp:26,
from /usr/local/lib/R/site-library/BH/include/boost/bind.hpp:22,
from callback_registry.cpp:2:
/usr/include/c++/6/bits/unique_ptr.h:49:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/local/lib/R/site-library/BH/include/boost/shared_ptr.hpp:17:0,
from callback_registry.cpp:3:
/usr/local/lib/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:256:65: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
template< class T, class R > struct sp_enable_if_auto_ptr< std::auto_ptr< T >, R >
^~~~~~~~
In file included from /usr/include/c++/6/memory:81:0,
from /usr/local/lib/R/site-library/BH/include/boost/config/no_tr1/memory.hpp:21,
from /usr/local/lib/R/site-library/BH/include/boost/get_pointer.hpp:14,
from /usr/local/lib/R/site-library/BH/include/boost/bind/mem_fn.hpp:25,
from /usr/local/lib/R/site-library/BH/include/boost/mem_fn.hpp:22,
from /usr/local/lib/R/site-library/BH/include/boost/bind/bind.hpp:26,
from /usr/local/lib/R/site-library/BH/include/boost/bind.hpp:22,
from callback_registry.cpp:2:
/usr/include/c++/6/bits/unique_ptr.h:49:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/local/lib/R/site-library/BH/include/boost/shared_ptr.hpp:17:0,
from callback_registry.cpp:3:
/usr/local/lib/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:471:31: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
explicit shared_ptr( std::auto_ptr<Y> & r ): px(r.get()), pn()
^~~~~~~~
In file included from /usr/include/c++/6/memory:81:0,
from /usr/local/lib/R/site-library/BH/include/boost/config/no_tr1/memory.hpp:21,
from /usr/local/lib/R/site-library/BH/include/boost/get_pointer.hpp:14,
from /usr/local/lib/R/site-library/BH/include/boost/bind/mem_fn.hpp:25,
from /usr/local/lib/R/site-library/BH/include/boost/mem_fn.hpp:22,
from /usr/local/lib/R/site-library/BH/include/boost/bind/bind.hpp:26,
from /usr/local/lib/R/site-library/BH/include/boost/bind.hpp:22,
from callback_registry.cpp:2:
/usr/include/c++/6/bits/unique_ptr.h:49:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/local/lib/R/site-library/BH/include/boost/shared_ptr.hpp:17:0,
from callback_registry.cpp:3:
/usr/local/lib/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:484:22: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
shared_ptr( std::auto_ptr<Y> && r ): px(r.get()), pn()
^~~~~~~~
In file included from /usr/include/c++/6/memory:81:0,
from /usr/local/lib/R/site-library/BH/include/boost/config/no_tr1/memory.hpp:21,
from /usr/local/lib/R/site-library/BH/include/boost/get_pointer.hpp:14,
from /usr/local/lib/R/site-library/BH/include/boost/bind/mem_fn.hpp:25,
from /usr/local/lib/R/site-library/BH/include/boost/mem_fn.hpp:22,
from /usr/local/lib/R/site-library/BH/include/boost/bind/bind.hpp:26,
from /usr/local/lib/R/site-library/BH/include/boost/bind.hpp:22,
from callback_registry.cpp:2:
/usr/include/c++/6/bits/unique_ptr.h:49:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/local/lib/R/site-library/BH/include/boost/shared_ptr.hpp:17:0,
from callback_registry.cpp:3:
/usr/local/lib/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:567:34: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
shared_ptr & operator=( std::auto_ptr<Y> & r )
^~~~~~~~
In file included from /usr/include/c++/6/memory:81:0,
from /usr/local/lib/R/site-library/BH/include/boost/config/no_tr1/memory.hpp:21,
from /usr/local/lib/R/site-library/BH/include/boost/get_pointer.hpp:14,
from /usr/local/lib/R/site-library/BH/include/boost/bind/mem_fn.hpp:25,
from /usr/local/lib/R/site-library/BH/include/boost/mem_fn.hpp:22,
from /usr/local/lib/R/site-library/BH/include/boost/bind/bind.hpp:26,
from /usr/local/lib/R/site-library/BH/include/boost/bind.hpp:22,
from callback_registry.cpp:2:
/usr/include/c++/6/bits/unique_ptr.h:49:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/local/lib/R/site-library/BH/include/boost/shared_ptr.hpp:17:0,
from callback_registry.cpp:3:
/usr/local/lib/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:576:34: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
shared_ptr & operator=( std::auto_ptr<Y> && r )
^~~~~~~~
In file included from /usr/include/c++/6/memory:81:0,
from /usr/local/lib/R/site-library/BH/include/boost/config/no_tr1/memory.hpp:21,
from /usr/local/lib/R/site-library/BH/include/boost/get_pointer.hpp:14,
from /usr/local/lib/R/site-library/BH/include/boost/bind/mem_fn.hpp:25,
from /usr/local/lib/R/site-library/BH/include/boost/mem_fn.hpp:22,
from /usr/local/lib/R/site-library/BH/include/boost/bind/bind.hpp:26,
from /usr/local/lib/R/site-library/BH/include/boost/bind.hpp:22,
from callback_registry.cpp:2:
/usr/include/c++/6/bits/unique_ptr.h:49:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/local/lib/R/site-library/BH/include/boost/shared_ptr.hpp:17:0,
from callback_registry.cpp:3:
/usr/local/lib/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp: In member function ‘boost::shared_ptr<T>& boost::shared_ptr<T>::operator=(std::auto_ptr<_Up>&&)’:
/usr/local/lib/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:578:38: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
this_type( static_cast< std::auto_ptr<Y> && >( r ) ).swap( *this );
^~~~~~~~
In file included from /usr/include/c++/6/memory:81:0,
from /usr/local/lib/R/site-library/BH/include/boost/config/no_tr1/memory.hpp:21,
from /usr/local/lib/R/site-library/BH/include/boost/get_pointer.hpp:14,
from /usr/local/lib/R/site-library/BH/include/boost/bind/mem_fn.hpp:25,
from /usr/local/lib/R/site-library/BH/include/boost/mem_fn.hpp:22,
from /usr/local/lib/R/site-library/BH/include/boost/bind/bind.hpp:26,
from /usr/local/lib/R/site-library/BH/include/boost/bind.hpp:22,
from callback_registry.cpp:2:
/usr/include/c++/6/bits/unique_ptr.h:49:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -pthread -DTHREADS_H_SUPPORT=-1 -I"/usr/local/lib/R/site-library/Rcpp/include" -I"/usr/local/lib/R/site-library/BH/include" -fpic -g -O2 -fdebug-prefix-map=/root/git/r-backports/stretch/r-base-3.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c init.c -o init.o
g++ -I"/usr/share/R/include" -DNDEBUG -pthread -DTHREADS_H_SUPPORT=-1 -I"/usr/local/lib/R/site-library/Rcpp/include" -I"/usr/local/lib/R/site-library/BH/include" -fpic -g -O2 -fdebug-prefix-map=/root/git/r-backports/stretch/r-base-3.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c later.cpp -o later.o
In file included from /usr/local/lib/R/site-library/BH/include/boost/bind/mem_fn.hpp:25:0,
from /usr/local/lib/R/site-library/BH/include/boost/mem_fn.hpp:22,
from /usr/local/lib/R/site-library/BH/include/boost/function/detail/prologue.hpp:18,
from /usr/local/lib/R/site-library/BH/include/boost/function.hpp:30,
from callback_registry.h:7,
from later.cpp:6:
/usr/local/lib/R/site-library/BH/include/boost/get_pointer.hpp:48:40: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
template<class T> T * get_pointer(std::auto_ptr<T> const& p)
^~~~~~~~
In file included from /usr/include/c++/6/bits/locale_conv.h:41:0,
from /usr/include/c++/6/locale:43,
from /usr/include/c++/6/iomanip:43,
from /usr/local/lib/R/site-library/Rcpp/include/RcppCommon.h:52,
from /usr/local/lib/R/site-library/Rcpp/include/Rcpp.h:27,
from later.cpp:2:
/usr/include/c++/6/bits/unique_ptr.h:49:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/local/lib/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:28:0,
from /usr/local/lib/R/site-library/BH/include/boost/shared_ptr.hpp:17,
from callback_registry.h:8,
from later.cpp:6:
/usr/local/lib/R/site-library/BH/include/boost/smart_ptr/detail/shared_count.hpp:355:33: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
explicit shared_count( std::auto_ptr<Y> & r ): pi_( new sp_counted_impl_p<Y>( r.get() ) )
^~~~~~~~
In file included from /usr/include/c++/6/bits/locale_conv.h:41:0,
from /usr/include/c++/6/locale:43,
from /usr/include/c++/6/iomanip:43,
from /usr/local/lib/R/site-library/Rcpp/include/RcppCommon.h:52,
from /usr/local/lib/R/site-library/Rcpp/include/Rcpp.h:27,
from later.cpp:2:
/usr/include/c++/6/bits/unique_ptr.h:49:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/local/lib/R/site-library/BH/include/boost/shared_ptr.hpp:17:0,
from callback_registry.h:8,
from later.cpp:6:
/usr/local/lib/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:256:65: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
template< class T, class R > struct sp_enable_if_auto_ptr< std::auto_ptr< T >, R >
^~~~~~~~
In file included from /usr/include/c++/6/bits/locale_conv.h:41:0,
from /usr/include/c++/6/locale:43,
from /usr/include/c++/6/iomanip:43,
from /usr/local/lib/R/site-library/Rcpp/include/RcppCommon.h:52,
from /usr/local/lib/R/site-library/Rcpp/include/Rcpp.h:27,
from later.cpp:2:
/usr/include/c++/6/bits/unique_ptr.h:49:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/local/lib/R/site-library/BH/include/boost/shared_ptr.hpp:17:0,
from callback_registry.h:8,
from later.cpp:6:
/usr/local/lib/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:471:31: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
explicit shared_ptr( std::auto_ptr<Y> & r ): px(r.get()), pn()
^~~~~~~~
In file included from /usr/include/c++/6/bits/locale_conv.h:41:0,
from /usr/include/c++/6/locale:43,
from /usr/include/c++/6/iomanip:43,
from /usr/local/lib/R/site-library/Rcpp/include/RcppCommon.h:52,
from /usr/local/lib/R/site-library/Rcpp/include/Rcpp.h:27,
from later.cpp:2:
/usr/include/c++/6/bits/unique_ptr.h:49:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/local/lib/R/site-library/BH/include/boost/shared_ptr.hpp:17:0,
from callback_registry.h:8,
from later.cpp:6:
/usr/local/lib/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:484:22: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
shared_ptr( std::auto_ptr<Y> && r ): px(r.get()), pn()
^~~~~~~~
In file included from /usr/include/c++/6/bits/locale_conv.h:41:0,
from /usr/include/c++/6/locale:43,
from /usr/include/c++/6/iomanip:43,
from /usr/local/lib/R/site-library/Rcpp/include/RcppCommon.h:52,
from /usr/local/lib/R/site-library/Rcpp/include/Rcpp.h:27,
from later.cpp:2:
/usr/include/c++/6/bits/unique_ptr.h:49:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/local/lib/R/site-library/BH/include/boost/shared_ptr.hpp:17:0,
from callback_registry.h:8,
from later.cpp:6:
/usr/local/lib/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:567:34: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
shared_ptr & operator=( std::auto_ptr<Y> & r )
^~~~~~~~
In file included from /usr/include/c++/6/bits/locale_conv.h:41:0,
from /usr/include/c++/6/locale:43,
from /usr/include/c++/6/iomanip:43,
from /usr/local/lib/R/site-library/Rcpp/include/RcppCommon.h:52,
from /usr/local/lib/R/site-library/Rcpp/include/Rcpp.h:27,
from later.cpp:2:
/usr/include/c++/6/bits/unique_ptr.h:49:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/local/lib/R/site-library/BH/include/boost/shared_ptr.hpp:17:0,
from callback_registry.h:8,
from later.cpp:6:
/usr/local/lib/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:576:34: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
shared_ptr & operator=( std::auto_ptr<Y> && r )
^~~~~~~~
In file included from /usr/include/c++/6/bits/locale_conv.h:41:0,
from /usr/include/c++/6/locale:43,
from /usr/include/c++/6/iomanip:43,
from /usr/local/lib/R/site-library/Rcpp/include/RcppCommon.h:52,
from /usr/local/lib/R/site-library/Rcpp/include/Rcpp.h:27,
from later.cpp:2:
/usr/include/c++/6/bits/unique_ptr.h:49:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/local/lib/R/site-library/BH/include/boost/shared_ptr.hpp:17:0,
from callback_registry.h:8,
from later.cpp:6:
/usr/local/lib/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp: In member function ‘boost::shared_ptr<T>& boost::shared_ptr<T>::operator=(std::auto_ptr<_Up>&&)’:
/usr/local/lib/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:578:38: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
this_type( static_cast< std::auto_ptr<Y> && >( r ) ).swap( *this );
^~~~~~~~
In file included from /usr/include/c++/6/bits/locale_conv.h:41:0,
from /usr/include/c++/6/locale:43,
from /usr/include/c++/6/iomanip:43,
from /usr/local/lib/R/site-library/Rcpp/include/RcppCommon.h:52,
from /usr/local/lib/R/site-library/Rcpp/include/Rcpp.h:27,
from later.cpp:2:
/usr/include/c++/6/bits/unique_ptr.h:49:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
g++ -I"/usr/share/R/include" -DNDEBUG -pthread -DTHREADS_H_SUPPORT=-1 -I"/usr/local/lib/R/site-library/Rcpp/include" -I"/usr/local/lib/R/site-library/BH/include" -fpic -g -O2 -fdebug-prefix-map=/root/git/r-backports/stretch/r-base-3.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c later_native.cpp -o later_native.o
In file included from /usr/local/lib/R/site-library/BH/include/boost/bind/mem_fn.hpp:25:0,
from /usr/local/lib/R/site-library/BH/include/boost/mem_fn.hpp:22,
from /usr/local/lib/R/site-library/BH/include/boost/function/detail/prologue.hpp:18,
from /usr/local/lib/R/site-library/BH/include/boost/function.hpp:30,
from callback_registry.h:7,
from later_native.cpp:1:
/usr/local/lib/R/site-library/BH/include/boost/get_pointer.hpp:48:40: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
template<class T> T * get_pointer(std::auto_ptr<T> const& p)
^~~~~~~~
In file included from /usr/include/c++/6/bits/locale_conv.h:41:0,
from /usr/include/c++/6/locale:43,
from /usr/include/c++/6/iomanip:43,
from /usr/local/lib/R/site-library/Rcpp/include/RcppCommon.h:52,
from /usr/local/lib/R/site-library/Rcpp/include/Rcpp.h:27,
from callback_registry.h:4,
from later_native.cpp:1:
/usr/include/c++/6/bits/unique_ptr.h:49:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/local/lib/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:28:0,
from /usr/local/lib/R/site-library/BH/include/boost/shared_ptr.hpp:17,
from callback_registry.h:8,
from later_native.cpp:1:
/usr/local/lib/R/site-library/BH/include/boost/smart_ptr/detail/shared_count.hpp:355:33: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
explicit shared_count( std::auto_ptr<Y> & r ): pi_( new sp_counted_impl_p<Y>( r.get() ) )
^~~~~~~~
In file included from /usr/include/c++/6/bits/locale_conv.h:41:0,
from /usr/include/c++/6/locale:43,
from /usr/include/c++/6/iomanip:43,
from /usr/local/lib/R/site-library/Rcpp/include/RcppCommon.h:52,
from /usr/local/lib/R/site-library/Rcpp/include/Rcpp.h:27,
from callback_registry.h:4,
from later_native.cpp:1:
/usr/include/c++/6/bits/unique_ptr.h:49:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/local/lib/R/site-library/BH/include/boost/shared_ptr.hpp:17:0,
from callback_registry.h:8,
from later_native.cpp:1:
/usr/local/lib/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:256:65: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
template< class T, class R > struct sp_enable_if_auto_ptr< std::auto_ptr< T >, R >
^~~~~~~~
In file included from /usr/include/c++/6/bits/locale_conv.h:41:0,
from /usr/include/c++/6/locale:43,
from /usr/include/c++/6/iomanip:43,
from /usr/local/lib/R/site-library/Rcpp/include/RcppCommon.h:52,
from /usr/local/lib/R/site-library/Rcpp/include/Rcpp.h:27,
from callback_registry.h:4,
from later_native.cpp:1:
/usr/include/c++/6/bits/unique_ptr.h:49:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/local/lib/R/site-library/BH/include/boost/shared_ptr.hpp:17:0,
from callback_registry.h:8,
from later_native.cpp:1:
/usr/local/lib/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:471:31: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
explicit shared_ptr( std::auto_ptr<Y> & r ): px(r.get()), pn()
^~~~~~~~
In file included from /usr/include/c++/6/bits/locale_conv.h:41:0,
from /usr/include/c++/6/locale:43,
from /usr/include/c++/6/iomanip:43,
from /usr/local/lib/R/site-library/Rcpp/include/RcppCommon.h:52,
from /usr/local/lib/R/site-library/Rcpp/include/Rcpp.h:27,
from callback_registry.h:4,
from later_native.cpp:1:
/usr/include/c++/6/bits/unique_ptr.h:49:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/local/lib/R/site-library/BH/include/boost/shared_ptr.hpp:17:0,
from callback_registry.h:8,
from later_native.cpp:1:
/usr/local/lib/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:484:22: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
shared_ptr( std::auto_ptr<Y> && r ): px(r.get()), pn()
^~~~~~~~
In file included from /usr/include/c++/6/bits/locale_conv.h:41:0,
from /usr/include/c++/6/locale:43,
from /usr/include/c++/6/iomanip:43,
from /usr/local/lib/R/site-library/Rcpp/include/RcppCommon.h:52,
from /usr/local/lib/R/site-library/Rcpp/include/Rcpp.h:27,
from callback_registry.h:4,
from later_native.cpp:1:
/usr/include/c++/6/bits/unique_ptr.h:49:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/local/lib/R/site-library/BH/include/boost/shared_ptr.hpp:17:0,
from callback_registry.h:8,
from later_native.cpp:1:
/usr/local/lib/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:567:34: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
shared_ptr & operator=( std::auto_ptr<Y> & r )
^~~~~~~~
In file included from /usr/include/c++/6/bits/locale_conv.h:41:0,
from /usr/include/c++/6/locale:43,
from /usr/include/c++/6/iomanip:43,
from /usr/local/lib/R/site-library/Rcpp/include/RcppCommon.h:52,
from /usr/local/lib/R/site-library/Rcpp/include/Rcpp.h:27,
from callback_registry.h:4,
from later_native.cpp:1:
/usr/include/c++/6/bits/unique_ptr.h:49:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/local/lib/R/site-library/BH/include/boost/shared_ptr.hpp:17:0,
from callback_registry.h:8,
from later_native.cpp:1:
/usr/local/lib/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:576:34: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
shared_ptr & operator=( std::auto_ptr<Y> && r )
^~~~~~~~
In file included from /usr/include/c++/6/bits/locale_conv.h:41:0,
from /usr/include/c++/6/locale:43,
from /usr/include/c++/6/iomanip:43,
from /usr/local/lib/R/site-library/Rcpp/include/RcppCommon.h:52,
from /usr/local/lib/R/site-library/Rcpp/include/Rcpp.h:27,
from callback_registry.h:4,
from later_native.cpp:1:
/usr/include/c++/6/bits/unique_ptr.h:49:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/local/lib/R/site-library/BH/include/boost/shared_ptr.hpp:17:0,
from callback_registry.h:8,
from later_native.cpp:1:
/usr/local/lib/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp: In member function ‘boost::shared_ptr<T>& boost::shared_ptr<T>::operator=(std::auto_ptr<_Up>&&)’:
/usr/local/lib/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:578:38: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
this_type( static_cast< std::auto_ptr<Y> && >( r ) ).swap( *this );
^~~~~~~~
In file included from /usr/include/c++/6/bits/locale_conv.h:41:0,
from /usr/include/c++/6/locale:43,
from /usr/include/c++/6/iomanip:43,
from /usr/local/lib/R/site-library/Rcpp/include/RcppCommon.h:52,
from /usr/local/lib/R/site-library/Rcpp/include/Rcpp.h:27,
from callback_registry.h:4,
from later_native.cpp:1:
/usr/include/c++/6/bits/unique_ptr.h:49:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
g++ -I"/usr/share/R/include" -DNDEBUG -pthread -DTHREADS_H_SUPPORT=-1 -I"/usr/local/lib/R/site-library/Rcpp/include" -I"/usr/local/lib/R/site-library/BH/include" -fpic -g -O2 -fdebug-prefix-map=/root/git/r-backports/stretch/r-base-3.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c later_posix.cpp -o later_posix.o
In file included from /usr/local/lib/R/site-library/BH/include/boost/bind/mem_fn.hpp:25:0,
from /usr/local/lib/R/site-library/BH/include/boost/mem_fn.hpp:22,
from /usr/local/lib/R/site-library/BH/include/boost/function/detail/prologue.hpp:18,
from /usr/local/lib/R/site-library/BH/include/boost/function.hpp:30,
from callback_registry.h:7,
from later_posix.cpp:10:
/usr/local/lib/R/site-library/BH/include/boost/get_pointer.hpp:48:40: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
template<class T> T * get_pointer(std::auto_ptr<T> const& p)
^~~~~~~~
In file included from /usr/include/c++/6/bits/locale_conv.h:41:0,
from /usr/include/c++/6/locale:43,
from /usr/include/c++/6/iomanip:43,
from /usr/local/lib/R/site-library/Rcpp/include/RcppCommon.h:52,
from /usr/local/lib/R/site-library/Rcpp/include/Rcpp.h:27,
from later_posix.cpp:3:
/usr/include/c++/6/bits/unique_ptr.h:49:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/local/lib/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:28:0,
from /usr/local/lib/R/site-library/BH/include/boost/shared_ptr.hpp:17,
from callback_registry.h:8,
from later_posix.cpp:10:
/usr/local/lib/R/site-library/BH/include/boost/smart_ptr/detail/shared_count.hpp:355:33: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
explicit shared_count( std::auto_ptr<Y> & r ): pi_( new sp_counted_impl_p<Y>( r.get() ) )
^~~~~~~~
In file included from /usr/include/c++/6/bits/locale_conv.h:41:0,
from /usr/include/c++/6/locale:43,
from /usr/include/c++/6/iomanip:43,
from /usr/local/lib/R/site-library/Rcpp/include/RcppCommon.h:52,
from /usr/local/lib/R/site-library/Rcpp/include/Rcpp.h:27,
from later_posix.cpp:3:
/usr/include/c++/6/bits/unique_ptr.h:49:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/local/lib/R/site-library/BH/include/boost/shared_ptr.hpp:17:0,
from callback_registry.h:8,
from later_posix.cpp:10:
/usr/local/lib/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:256:65: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
template< class T, class R > struct sp_enable_if_auto_ptr< std::auto_ptr< T >, R >
^~~~~~~~
In file included from /usr/include/c++/6/bits/locale_conv.h:41:0,
from /usr/include/c++/6/locale:43,
from /usr/include/c++/6/iomanip:43,
from /usr/local/lib/R/site-library/Rcpp/include/RcppCommon.h:52,
from /usr/local/lib/R/site-library/Rcpp/include/Rcpp.h:27,
from later_posix.cpp:3:
/usr/include/c++/6/bits/unique_ptr.h:49:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/local/lib/R/site-library/BH/include/boost/shared_ptr.hpp:17:0,
from callback_registry.h:8,
from later_posix.cpp:10:
/usr/local/lib/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:471:31: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
explicit shared_ptr( std::auto_ptr<Y> & r ): px(r.get()), pn()
^~~~~~~~
In file included from /usr/include/c++/6/bits/locale_conv.h:41:0,
from /usr/include/c++/6/locale:43,
from /usr/include/c++/6/iomanip:43,
from /usr/local/lib/R/site-library/Rcpp/include/RcppCommon.h:52,
from /usr/local/lib/R/site-library/Rcpp/include/Rcpp.h:27,
from later_posix.cpp:3:
/usr/include/c++/6/bits/unique_ptr.h:49:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/local/lib/R/site-library/BH/include/boost/shared_ptr.hpp:17:0,
from callback_registry.h:8,
from later_posix.cpp:10:
/usr/local/lib/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:484:22: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
shared_ptr( std::auto_ptr<Y> && r ): px(r.get()), pn()
^~~~~~~~
In file included from /usr/include/c++/6/bits/locale_conv.h:41:0,
from /usr/include/c++/6/locale:43,
from /usr/include/c++/6/iomanip:43,
from /usr/local/lib/R/site-library/Rcpp/include/RcppCommon.h:52,
from /usr/local/lib/R/site-library/Rcpp/include/Rcpp.h:27,
from later_posix.cpp:3:
/usr/include/c++/6/bits/unique_ptr.h:49:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/local/lib/R/site-library/BH/include/boost/shared_ptr.hpp:17:0,
from callback_registry.h:8,
from later_posix.cpp:10:
/usr/local/lib/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:567:34: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
shared_ptr & operator=( std::auto_ptr<Y> & r )
^~~~~~~~
In file included from /usr/include/c++/6/bits/locale_conv.h:41:0,
from /usr/include/c++/6/locale:43,
from /usr/include/c++/6/iomanip:43,
from /usr/local/lib/R/site-library/Rcpp/include/RcppCommon.h:52,
from /usr/local/lib/R/site-library/Rcpp/include/Rcpp.h:27,
from later_posix.cpp:3:
/usr/include/c++/6/bits/unique_ptr.h:49:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/local/lib/R/site-library/BH/include/boost/shared_ptr.hpp:17:0,
from callback_registry.h:8,
from later_posix.cpp:10:
/usr/local/lib/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:576:34: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
shared_ptr & operator=( std::auto_ptr<Y> && r )
^~~~~~~~
In file included from /usr/include/c++/6/bits/locale_conv.h:41:0,
from /usr/include/c++/6/locale:43,
from /usr/include/c++/6/iomanip:43,
from /usr/local/lib/R/site-library/Rcpp/include/RcppCommon.h:52,
from /usr/local/lib/R/site-library/Rcpp/include/Rcpp.h:27,
from later_posix.cpp:3:
/usr/include/c++/6/bits/unique_ptr.h:49:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/local/lib/R/site-library/BH/include/boost/shared_ptr.hpp:17:0,
from callback_registry.h:8,
from later_posix.cpp:10:
/usr/local/lib/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp: In member function ‘boost::shared_ptr<T>& boost::shared_ptr<T>::operator=(std::auto_ptr<_Up>&&)’:
/usr/local/lib/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:578:38: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
this_type( static_cast< std::auto_ptr<Y> && >( r ) ).swap( *this );
^~~~~~~~
In file included from /usr/include/c++/6/bits/locale_conv.h:41:0,
from /usr/include/c++/6/locale:43,
from /usr/include/c++/6/iomanip:43,
from /usr/local/lib/R/site-library/Rcpp/include/RcppCommon.h:52,
from /usr/local/lib/R/site-library/Rcpp/include/Rcpp.h:27,
from later_posix.cpp:3:
/usr/include/c++/6/bits/unique_ptr.h:49:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
later_posix.cpp: In function ‘void deInitialize()’:
later_posix.cpp:187:33: warning: ignoring return value of ‘ssize_t write(int, const void*, size_t)’, declared with attribute warn_unused_result [-Wunused-result]
write(dummy_pipe_in, "a", 1);
^
g++ -I"/usr/share/R/include" -DNDEBUG -pthread -DTHREADS_H_SUPPORT=-1 -I"/usr/local/lib/R/site-library/Rcpp/include" -I"/usr/local/lib/R/site-library/BH/include" -fpic -g -O2 -fdebug-prefix-map=/root/git/r-backports/stretch/r-base-3.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c later_win32.cpp -o later_win32.o
g++ -I"/usr/share/R/include" -DNDEBUG -pthread -DTHREADS_H_SUPPORT=-1 -I"/usr/local/lib/R/site-library/Rcpp/include" -I"/usr/local/lib/R/site-library/BH/include" -fpic -g -O2 -fdebug-prefix-map=/root/git/r-backports/stretch/r-base-3.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c timer_posix.cpp -o timer_posix.o
In file included from /usr/local/lib/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:28:0,
from /usr/local/lib/R/site-library/BH/include/boost/shared_ptr.hpp:17,
from timestamp.h:4,
from timer_posix.h:6,
from timer_posix.cpp:6:
/usr/local/lib/R/site-library/BH/include/boost/smart_ptr/detail/shared_count.hpp:355:33: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
explicit shared_count( std::auto_ptr<Y> & r ): pi_( new sp_counted_impl_p<Y>( r.get() ) )
^~~~~~~~
In file included from /usr/include/c++/6/memory:81:0,
from /usr/local/lib/R/site-library/BH/include/boost/config/no_tr1/memory.hpp:21,
from /usr/local/lib/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:23,
from /usr/local/lib/R/site-library/BH/include/boost/shared_ptr.hpp:17,
from timestamp.h:4,
from timer_posix.h:6,
from timer_posix.cpp:6:
/usr/include/c++/6/bits/unique_ptr.h:49:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/local/lib/R/site-library/BH/include/boost/shared_ptr.hpp:17:0,
from timestamp.h:4,
from timer_posix.h:6,
from timer_posix.cpp:6:
/usr/local/lib/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:256:65: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
template< class T, class R > struct sp_enable_if_auto_ptr< std::auto_ptr< T >, R >
^~~~~~~~
In file included from /usr/include/c++/6/memory:81:0,
from /usr/local/lib/R/site-library/BH/include/boost/config/no_tr1/memory.hpp:21,
from /usr/local/lib/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:23,
from /usr/local/lib/R/site-library/BH/include/boost/shared_ptr.hpp:17,
from timestamp.h:4,
from timer_posix.h:6,
from timer_posix.cpp:6:
/usr/include/c++/6/bits/unique_ptr.h:49:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/local/lib/R/site-library/BH/include/boost/shared_ptr.hpp:17:0,
from timestamp.h:4,
from timer_posix.h:6,
from timer_posix.cpp:6:
/usr/local/lib/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:471:31: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
explicit shared_ptr( std::auto_ptr<Y> & r ): px(r.get()), pn()
^~~~~~~~
In file included from /usr/include/c++/6/memory:81:0,
from /usr/local/lib/R/site-library/BH/include/boost/config/no_tr1/memory.hpp:21,
from /usr/local/lib/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:23,
from /usr/local/lib/R/site-library/BH/include/boost/shared_ptr.hpp:17,
from timestamp.h:4,
from timer_posix.h:6,
from timer_posix.cpp:6:
/usr/include/c++/6/bits/unique_ptr.h:49:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/local/lib/R/site-library/BH/include/boost/shared_ptr.hpp:17:0,
from timestamp.h:4,
from timer_posix.h:6,
from timer_posix.cpp:6:
/usr/local/lib/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:484:22: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
shared_ptr( std::auto_ptr<Y> && r ): px(r.get()), pn()
^~~~~~~~
In file included from /usr/include/c++/6/memory:81:0,
from /usr/local/lib/R/site-library/BH/include/boost/config/no_tr1/memory.hpp:21,
from /usr/local/lib/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:23,
from /usr/local/lib/R/site-library/BH/include/boost/shared_ptr.hpp:17,
from timestamp.h:4,
from timer_posix.h:6,
from timer_posix.cpp:6:
/usr/include/c++/6/bits/unique_ptr.h:49:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/local/lib/R/site-library/BH/include/boost/shared_ptr.hpp:17:0,
from timestamp.h:4,
from timer_posix.h:6,
from timer_posix.cpp:6:
/usr/local/lib/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:567:34: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
shared_ptr & operator=( std::auto_ptr<Y> & r )
^~~~~~~~
In file included from /usr/include/c++/6/memory:81:0,
from /usr/local/lib/R/site-library/BH/include/boost/config/no_tr1/memory.hpp:21,
from /usr/local/lib/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:23,
from /usr/local/lib/R/site-library/BH/include/boost/shared_ptr.hpp:17,
from timestamp.h:4,
from timer_posix.h:6,
from timer_posix.cpp:6:
/usr/include/c++/6/bits/unique_ptr.h:49:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/local/lib/R/site-library/BH/include/boost/shared_ptr.hpp:17:0,
from timestamp.h:4,
from timer_posix.h:6,
from timer_posix.cpp:6:
/usr/local/lib/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:576:34: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
shared_ptr & operator=( std::auto_ptr<Y> && r )
^~~~~~~~
In file included from /usr/include/c++/6/memory:81:0,
from /usr/local/lib/R/site-library/BH/include/boost/config/no_tr1/memory.hpp:21,
from /usr/local/lib/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:23,
from /usr/local/lib/R/site-library/BH/include/boost/shared_ptr.hpp:17,
from timestamp.h:4,
from timer_posix.h:6,
from timer_posix.cpp:6:
/usr/include/c++/6/bits/unique_ptr.h:49:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/local/lib/R/site-library/BH/include/boost/shared_ptr.hpp:17:0,
from timestamp.h:4,
from timer_posix.h:6,
from timer_posix.cpp:6:
/usr/local/lib/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp: In member function ‘boost::shared_ptr<T>& boost::shared_ptr<T>::operator=(std::auto_ptr<_Up>&&)’:
/usr/local/lib/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:578:38: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
this_type( static_cast< std::auto_ptr<Y> && >( r ) ).swap( *this );
^~~~~~~~
In file included from /usr/include/c++/6/memory:81:0,
from /usr/local/lib/R/site-library/BH/include/boost/config/no_tr1/memory.hpp:21,
from /usr/local/lib/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:23,
from /usr/local/lib/R/site-library/BH/include/boost/shared_ptr.hpp:17,
from timestamp.h:4,
from timer_posix.h:6,
from timer_posix.cpp:6:
/usr/include/c++/6/bits/unique_ptr.h:49:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/local/lib/R/site-library/BH/include/boost/bind/mem_fn.hpp:25:0,
from /usr/local/lib/R/site-library/BH/include/boost/mem_fn.hpp:22,
from /usr/local/lib/R/site-library/BH/include/boost/function/detail/prologue.hpp:18,
from /usr/local/lib/R/site-library/BH/include/boost/function.hpp:30,
from timer_posix.h:7,
from timer_posix.cpp:6:
/usr/local/lib/R/site-library/BH/include/boost/get_pointer.hpp: At global scope:
/usr/local/lib/R/site-library/BH/include/boost/get_pointer.hpp:48:40: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
template<class T> T * get_pointer(std::auto_ptr<T> const& p)
^~~~~~~~
In file included from /usr/include/c++/6/memory:81:0,
from /usr/local/lib/R/site-library/BH/include/boost/config/no_tr1/memory.hpp:21,
from /usr/local/lib/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:23,
from /usr/local/lib/R/site-library/BH/include/boost/shared_ptr.hpp:17,
from timestamp.h:4,
from timer_posix.h:6,
from timer_posix.cpp:6:
/usr/include/c++/6/bits/unique_ptr.h:49:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
g++ -I"/usr/share/R/include" -DNDEBUG -pthread -DTHREADS_H_SUPPORT=-1 -I"/usr/local/lib/R/site-library/Rcpp/include" -I"/usr/local/lib/R/site-library/BH/include" -fpic -g -O2 -fdebug-prefix-map=/root/git/r-backports/stretch/r-base-3.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c timestamp_unix.cpp -o timestamp_unix.o
In file included from /usr/local/lib/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:28:0,
from /usr/local/lib/R/site-library/BH/include/boost/shared_ptr.hpp:17,
from timestamp.h:4,
from timestamp_unix.cpp:4:
/usr/local/lib/R/site-library/BH/include/boost/smart_ptr/detail/shared_count.hpp:355:33: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
explicit shared_count( std::auto_ptr<Y> & r ): pi_( new sp_counted_impl_p<Y>( r.get() ) )
^~~~~~~~
In file included from /usr/include/c++/6/memory:81:0,
from /usr/local/lib/R/site-library/BH/include/boost/config/no_tr1/memory.hpp:21,
from /usr/local/lib/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:23,
from /usr/local/lib/R/site-library/BH/include/boost/shared_ptr.hpp:17,
from timestamp.h:4,
from timestamp_unix.cpp:4:
/usr/include/c++/6/bits/unique_ptr.h:49:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/local/lib/R/site-library/BH/include/boost/shared_ptr.hpp:17:0,
from timestamp.h:4,
from timestamp_unix.cpp:4:
/usr/local/lib/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:256:65: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
template< class T, class R > struct sp_enable_if_auto_ptr< std::auto_ptr< T >, R >
^~~~~~~~
In file included from /usr/include/c++/6/memory:81:0,
from /usr/local/lib/R/site-library/BH/include/boost/config/no_tr1/memory.hpp:21,
from /usr/local/lib/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:23,
from /usr/local/lib/R/site-library/BH/include/boost/shared_ptr.hpp:17,
from timestamp.h:4,
from timestamp_unix.cpp:4:
/usr/include/c++/6/bits/unique_ptr.h:49:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/local/lib/R/site-library/BH/include/boost/shared_ptr.hpp:17:0,
from timestamp.h:4,
from timestamp_unix.cpp:4:
/usr/local/lib/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:471:31: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
explicit shared_ptr( std::auto_ptr<Y> & r ): px(r.get()), pn()
^~~~~~~~
In file included from /usr/include/c++/6/memory:81:0,
from /usr/local/lib/R/site-library/BH/include/boost/config/no_tr1/memory.hpp:21,
from /usr/local/lib/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:23,
from /usr/local/lib/R/site-library/BH/include/boost/shared_ptr.hpp:17,
from timestamp.h:4,
from timestamp_unix.cpp:4:
/usr/include/c++/6/bits/unique_ptr.h:49:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/local/lib/R/site-library/BH/include/boost/shared_ptr.hpp:17:0,
from timestamp.h:4,
from timestamp_unix.cpp:4:
/usr/local/lib/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:484:22: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
shared_ptr( std::auto_ptr<Y> && r ): px(r.get()), pn()
^~~~~~~~
In file included from /usr/include/c++/6/memory:81:0,
from /usr/local/lib/R/site-library/BH/include/boost/config/no_tr1/memory.hpp:21,
from /usr/local/lib/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:23,
from /usr/local/lib/R/site-library/BH/include/boost/shared_ptr.hpp:17,
from timestamp.h:4,
from timestamp_unix.cpp:4:
/usr/include/c++/6/bits/unique_ptr.h:49:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/local/lib/R/site-library/BH/include/boost/shared_ptr.hpp:17:0,
from timestamp.h:4,
from timestamp_unix.cpp:4:
/usr/local/lib/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:567:34: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
shared_ptr & operator=( std::auto_ptr<Y> & r )
^~~~~~~~
In file included from /usr/include/c++/6/memory:81:0,
from /usr/local/lib/R/site-library/BH/include/boost/config/no_tr1/memory.hpp:21,
from /usr/local/lib/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:23,
from /usr/local/lib/R/site-library/BH/include/boost/shared_ptr.hpp:17,
from timestamp.h:4,
from timestamp_unix.cpp:4:
/usr/include/c++/6/bits/unique_ptr.h:49:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/local/lib/R/site-library/BH/include/boost/shared_ptr.hpp:17:0,
from timestamp.h:4,
from timestamp_unix.cpp:4:
/usr/local/lib/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:576:34: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
shared_ptr & operator=( std::auto_ptr<Y> && r )
^~~~~~~~
In file included from /usr/include/c++/6/memory:81:0,
from /usr/local/lib/R/site-library/BH/include/boost/config/no_tr1/memory.hpp:21,
from /usr/local/lib/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:23,
from /usr/local/lib/R/site-library/BH/include/boost/shared_ptr.hpp:17,
from timestamp.h:4,
from timestamp_unix.cpp:4:
/usr/include/c++/6/bits/unique_ptr.h:49:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /usr/local/lib/R/site-library/BH/include/boost/shared_ptr.hpp:17:0,
from timestamp.h:4,
from timestamp_unix.cpp:4:
/usr/local/lib/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp: In member function ‘boost::shared_ptr<T>& boost::shared_ptr<T>::operator=(std::auto_ptr<_Up>&&)’:
/usr/local/lib/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:578:38: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
this_type( static_cast< std::auto_ptr<Y> && >( r ) ).swap( *this );
^~~~~~~~
In file included from /usr/include/c++/6/memory:81:0,
from /usr/local/lib/R/site-library/BH/include/boost/config/no_tr1/memory.hpp:21,
from /usr/local/lib/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:23,
from /usr/local/lib/R/site-library/BH/include/boost/shared_ptr.hpp:17,
from timestamp.h:4,
from timestamp_unix.cpp:4:
/usr/include/c++/6/bits/unique_ptr.h:49:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
g++ -I"/usr/share/R/include" -DNDEBUG -pthread -DTHREADS_H_SUPPORT=-1 -I"/usr/local/lib/R/site-library/Rcpp/include" -I"/usr/local/lib/R/site-library/BH/include" -fpic -g -O2 -fdebug-prefix-map=/root/git/r-backports/stretch/r-base-3.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c timestamp_win32.cpp -o timestamp_win32.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -pthread -DTHREADS_H_SUPPORT=-1 -I"/usr/local/lib/R/site-library/Rcpp/include" -I"/usr/local/lib/R/site-library/BH/include" -fpic -g -O2 -fdebug-prefix-map=/root/git/r-backports/stretch/r-base-3.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c tinycthread/tinycthread.c -o tinycthread/tinycthread.o
g++ -shared -L/usr/lib/R/lib -Wl,-z,relro -o later.so RcppExports.o callback_registry.o init.o later.o later_native.o later_posix.o later_win32.o timer_posix.o timestamp_unix.o timestamp_win32.o -pthread ./tinycthread/tinycthread.o -L/usr/lib/R/lib -lR
installing to /usr/local/lib/R/site-library/later/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
Error: package or namespace load failed for ‘later’ in dyn.load(file, DLLpath = DLLpath, ...):
unable to load shared object '/usr/local/lib/R/site-library/later/libs/later.so':
/usr/local/lib/R/site-library/later/libs/later.so: undefined symbol: _ZN5boost7atomics6detail8lockpool11scoped_lockD1Ev
Error: loading failed
Execution halted
ERROR: loading failed
* removing ‘/usr/local/lib/R/site-library/later’
</detail>
Any idea why i'm failing to install it ?