quantumjot / pyfolding-notebooks

Notebooks and example data for PyFolding

PyFolding-Notebooks

NOTE: These are the example data files and notebooks for PyFolding. Please see the PyFolding repository for the software. https://github.com/quantumjot/PyFolding

PyFolding is a simple Python based framework for fitting kinetic and thermodynamic models to protein folding data. It includes several basic models and is extensible to enable fitting of more interesting models.

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Citation

PyFolding: An open-source software package for graphing, analysis and simulation
of thermodynamic and kinetic models of protein folding
Lowe AR, Perez-Riba A, Itzhaki L, Main E (2018) Biophys J.
http://dx.doi.org/10.1016/j.bpj.2017.11.3779

@article{Lowe27112017,
  author = {Lowe, Alan R. and Perez-Riba, Albert and Itzhaki, Laura S. and Main, Ewan R.G.},
  title = {PyFolding: Open-Source Graphing, Simulation, and Analysis of the
    Biophysical Properties of Proteins},
  volume = {114},
  number = {3},
  pages = {511-521},
  year = {2018},
  doi = {10.1016/j.bpj.2017.11.3779},
  URL = {http://dx.doi.org/10.1016/j.bpj.2017.11.3779},
  eprint = {http://www.cell.com/biophysj/fulltext/S0006-3495(17)35041-5},
  journal = {Biophysical Journal}
}