I am trying to download a collection from the TCIA archive using slicer. I
have successfully installed the TCIA browser module and added it the key for
my TCIA account.
[DEBUG][Qt] 11.01.2017 20:06:46 [] (unknown:0) - Session start time .......:
2017-01-11 20:06:46
[DEBUG][Qt] 11.01.2017 20:06:46 [] (unknown:0) - Slicer version ...........:
4.6.2 (revision 25516) win-amd64 - installed
[DEBUG][Qt] 11.01.2017 20:06:46 [] (unknown:0) - Operating system .........:
Windows / 7 / Service Pack 1 (Build 7601) - 64-bit
[DEBUG][Qt] 11.01.2017 20:06:46 [] (unknown:0) - Memory ...................:
6066 MB physical, 12131 MB virtual
[DEBUG][Qt] 11.01.2017 20:06:46 [] (unknown:0) - CPU ......................:
GenuineIntel , 2 cores, 16 logical processors
[DEBUG][Qt] 11.01.2017 20:06:46 [] (unknown:0) - Developer mode enabled ...:
no
[DEBUG][Qt] 11.01.2017 20:06:46 [] (unknown:0) - Prefer executable CLI ....:
no
[DEBUG][Qt] 11.01.2017 20:06:46 [] (unknown:0) - Additional module paths ..:
C:/Users/rayox010/AppData/Roaming/NA-MIC/Extensions-25516/DeveloperToolsForExtensions/lib/Slicer-4.6/qt-scripted-modules,
C:\programas\Slicer_4_6_2\XNATSlicer-master\XNATSlicer,
C:/Users/rayox010/AppData/Roaming/NA-MIC/Extensions-25516/VolumeClip/lib/Slicer-4.6/qt-scripted-modules,
C:/Users/rayox010/AppData/Roaming/NA-MIC/Extensions-25516/TCIABrowser/lib/Slicer-4.6/qt-scripted-modules
[DEBUG][Qt] 11.01.2017 20:06:46 [] (unknown:0) - Number of registered
modules: 136
[DEBUG][Qt] 11.01.2017 20:06:46 [] (unknown:0) - Number of instantiated
modules: 136
[INFO][Stream] 11.01.2017 20:06:47 [] (unknown:0) - Initializing terminology
mapping for map file
C:/programas/Slicer_4_6_2/share/Slicer-4.6/ColorFiles/Terminology//GenericAnatomyColors-SNOMED.csv
[INFO][Stream] 11.01.2017 20:06:47 [] (unknown:0) - 288 terms were read for
Slicer LUT GenericAnatomyColors
[DEBUG][Qt] 11.01.2017 20:06:47 [] (unknown:0) - Number of loaded modules:
136
[DEBUG][Qt] 11.01.2017 20:06:47 [] (unknown:0) - Switch to module:
"Welcome"
[WARNING][Qt] 11.01.2017 20:07:11 [] (unknown:0) - libpng warning: iCCP:
known incorrect sRGB profile
[WARNING][Qt] 11.01.2017 20:07:11 [] (unknown:0) - libpng warning: iCCP:
known incorrect sRGB profile
[DEBUG][Qt] 11.01.2017 20:07:14 [] (unknown:0) - Switch to module:
"TCIABrowser"
[DEBUG][Qt] 11.01.2017 20:07:14 [] (unknown:0) -
ctkDICOMModelPrivate::generateQuery: query is: SELECT UID as UID,
PatientsName as Name, PatientsAge as Age, PatientsBirthDate as Date,
PatientID as "Subject ID" FROM Patients ORDER BY "Name" DESC
[DEBUG][Qt] 11.01.2017 20:07:14 [] (unknown:0) -
ctkDICOMModelPrivate::updateQueries for Root: query is: SELECT UID as UID,
PatientsName as Name, PatientsAge as Age, PatientsBirthDate as Date,
PatientID as "Subject ID" FROM Patients ORDER BY "Name" DESC
[WARNING][Qt] 11.01.2017 20:07:14 [] (unknown:0) - QSqlQuery::exec: database
not open
[DEBUG][Qt] 11.01.2017 20:07:14 [] (unknown:0) -
ctkDICOMModelPrivate::generateQuery: query is: SELECT UID as UID,
PatientsName as Name, PatientsAge as Age, PatientsBirthDate as Date,
PatientID as "Subject ID" FROM Patients ORDER BY "Name" DESC
[DEBUG][Qt] 11.01.2017 20:07:14 [] (unknown:0) -
ctkDICOMModelPrivate::updateQueries for Root: query is: SELECT UID as UID,
PatientsName as Name, PatientsAge as Age, PatientsBirthDate as Date,
PatientID as "Subject ID" FROM Patients ORDER BY "Name" DESC
[DEBUG][Qt] 11.01.2017 20:07:14 [] (unknown:0) -
ctkDICOMModelPrivate::generateQuery: query is: SELECT StudyInstanceUID as
UID, StudyDescription as Name, ModalitiesInStudy as Scan, StudyDate as Date,
AccessionNumber as Number, InstitutionName as Institution,
ReferringPhysician as Referrer, PerformingPhysiciansName as Performer FROM
Studies WHERE PatientsUID='30' ORDER BY "Name" DESC
[DEBUG][Qt] 11.01.2017 20:07:14 [] (unknown:0) -
ctkDICOMModelPrivate::updateQueries for Patient: query is: SELECT
StudyInstanceUID as UID, StudyDescription as Name, ModalitiesInStudy as
Scan, StudyDate as Date, AccessionNumber as Number, InstitutionName as
Institution, ReferringPhysician as Referrer, PerformingPhysiciansName as
Performer FROM Studies WHERE PatientsUID='30' ORDER BY "Name" DESC
[DEBUG][Qt] 11.01.2017 20:07:14 [] (unknown:0) -
ctkDICOMModelPrivate::generateQuery: query is: SELECT StudyInstanceUID as
UID, StudyDescription as Name, ModalitiesInStudy as Scan, StudyDate as Date,
AccessionNumber as Number, InstitutionName as Institution,
ReferringPhysician as Referrer, PerformingPhysiciansName as Performer FROM
Studies WHERE PatientsUID='31' ORDER BY "Name" DESC
[DEBUG][Qt] 11.01.2017 20:07:14 [] (unknown:0) -
ctkDICOMModelPrivate::updateQueries for Patient: query is: SELECT
StudyInstanceUID as UID, StudyDescription as Name, ModalitiesInStudy as
Scan, StudyDate as Date, AccessionNumber as Number, InstitutionName as
Institution, ReferringPhysician as Referrer, PerformingPhysiciansName as
Performer FROM Studies WHERE PatientsUID='31' ORDER BY "Name" DESC
[CRITICAL][Stream] 11.01.2017 20:07:40 [] (unknown:0) - Traceback (most
recent call last):
[CRITICAL][Stream] 11.01.2017 20:07:40 [] (unknown:0) - File
"C:/Users/rayox010/AppData/Roaming/NA-MIC/Extensions-25516/TCIABrowser/lib/Slicer-4.6/qt-scripted-modules/TCIABrowser.py",
line 755, in onLoadButton
[CRITICAL][Stream] 11.01.2017 20:07:40 [] (unknown:0) -
self.addSelectedToDownloadQueue()
[CRITICAL][Stream] 11.01.2017 20:07:40 [] (unknown:0) - File
"C:/Users/rayox010/AppData/Roaming/NA-MIC/Extensions-25516/TCIABrowser/lib/Slicer-4.6/qt-scripted-modules/TCIABrowser.py",
line 814, in addSelectedToDownloadQueue
[CRITICAL][Stream] 11.01.2017 20:07:40 [] (unknown:0) - loadables =
plugin.examine([fileList])
[CRITICAL][Stream] 11.01.2017 20:07:40 [] (unknown:0) - File
"C:\programas\Slicer_4_6_2\lib\Slicer-4.6\qt-scripted-modules\DICOMLib\DICOMPlugin.py",
line 119, in examine
[CRITICAL][Stream] 11.01.2017 20:07:40 [] (unknown:0) - return
self.examineForImport(fileList)
[CRITICAL][Stream] 11.01.2017 20:07:40 [] (unknown:0) - File
"C:/programas/Slicer_4_6_2/lib/Slicer-4.6/qt-scripted-modules/DICOMScalarVolumePlugin.py",
line 52, in examineForImport
[CRITICAL][Stream] 11.01.2017 20:07:40 [] (unknown:0) -
loadablesForFiles = self.examineFiles(files)
[CRITICAL][Stream] 11.01.2017 20:07:40 [] (unknown:0) - File
"C:/programas/Slicer_4_6_2/lib/Slicer-4.6/qt-scripted-modules/DICOMScalarVolumePlugin.py",
line 67, in examineFiles
[CRITICAL][Stream] 11.01.2017 20:07:40 [] (unknown:0) - seriesUID =
slicer.dicomDatabase.fileValue(files[0],self.tags['seriesUID'])
[CRITICAL][Stream] 11.01.2017 20:07:40 [] (unknown:0) - IndexError: tuple
index out of range
Thanks in advance.
Félix.