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codes for analysis in "Integrated Spatial Multi-Omics Analysis Reveals Regional Features and cGAS Pathway Involvement in HCC Response to Combined TACE and ICB Treatment"

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codes for analysis in "Integrated Spatial Multi-Omics Analysis Reveals Regional Features and cGAS Pathway Involvement in HCC Response to Combined TACE and ICB Treatment"

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preProcessing_fm.R: Contains main code for IMC data preprocessing steps and cell type identification
IMCAnalysis_fm.R: Main codes for IMC data spatial analysis
scAnalysis_fm.R: Main codes for scRNAseq data analysis
stAnalysis_fm.R: Main codes for spatial transcriptomic data analysis

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