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Pjotr Prins's Projects

sambamba icon sambamba

Library for working with SAM/BAM/CRAM formats written in D programming language

sciruby icon sciruby

Tools for scientific computation in Ruby/Rails

smoothxg icon smoothxg

linearize and simplify variation graphs using blocked partial order alignment

swig2doc icon swig2doc

Convert SWIG generated to documentation

vcflib icon vcflib

C++ library and cmdline tools for parsing and manipulating VCF files

viral-analysis icon viral-analysis

Workflows for viral analysis (as part of COVID-19 Biohackathon)

wfa2-lib icon wfa2-lib

WFA2-lib: Wavefront alignment algorithm library v2

wfmash icon wfmash

base-accurate DNA sequence alignments using WFA and mashmap2

wgcna icon wgcna

GN2 adaption of the CRAN R package repository. WGCNA — Weighted Correlation Network Analysis. Homepage: http://www.genetics.ucla.edu/labs/horvath/CoexpressionNetwork/Rpackages/WGCNA/

whedon icon whedon

Command-line utilities to manage JOSS submissions. May one day be a sentient being.

whedon-api icon whedon-api

A small service that provides the basic Whedon API

wikitexer icon wikitexer

Mixing wiki style syntax with LaTex to generate HTML docs (and pure LaTeX)

yaj icon yaj

Pilot project for Biohackathon 2017

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