pangeo-data / escience-2022 Goto Github PK

Hi,
I cannot login to jupyterHub even though I have followed all the steps from 1 to 4. I get 403 forbidden when it opens that page.
Any help? Am I approved?
Best regards,
maher.

@annefou
After conda activate egi

pip install fedcloudclient

does not work and results in error output::

Building wheels for collected packages: psutil, netifaces
Building wheel for psutil (pyproject.toml) ... error
error: subprocess-exited-with-error

× Building wheel for psutil (pyproject.toml) did not run successfully.
│ exit code: 1
╰─> [43 lines of output]
running bdist_wheel
running build
running build_py
creating build
creating build/lib.linux-x86_64-cpython-311
creating build/lib.linux-x86_64-cpython-311/psutil
copying psutil/init.py -> build/lib.linux-x86_64-cpython-311/psutil
copying psutil/_pssunos.py -> build/lib.linux-x86_64-cpython-311/psutil
copying psutil/_psposix.py -> build/lib.linux-x86_64-cpython-311/psutil
copying psutil/_psosx.py -> build/lib.linux-x86_64-cpython-311/psutil
copying psutil/_pswindows.py -> build/lib.linux-x86_64-cpython-311/psutil
copying psutil/_psaix.py -> build/lib.linux-x86_64-cpython-311/psutil
copying psutil/_compat.py -> build/lib.linux-x86_64-cpython-311/psutil
copying psutil/_psbsd.py -> build/lib.linux-x86_64-cpython-311/psutil
copying psutil/_common.py -> build/lib.linux-x86_64-cpython-311/psutil
copying psutil/_pslinux.py -> build/lib.linux-x86_64-cpython-311/psutil
creating build/lib.linux-x86_64-cpython-311/psutil/tests
copying psutil/tests/init.py -> build/lib.linux-x86_64-cpython-311/psutil/tests
copying psutil/tests/test_sunos.py -> build/lib.linux-x86_64-cpython-311/psutil/tests
copying psutil/tests/test_process.py -> build/lib.linux-x86_64-cpython-311/psutil/tests
copying psutil/tests/test_system.py -> build/lib.linux-x86_64-cpython-311/psutil/tests
copying psutil/tests/test_aix.py -> build/lib.linux-x86_64-cpython-311/psutil/tests
copying psutil/tests/main.py -> build/lib.linux-x86_64-cpython-311/psutil/tests
copying psutil/tests/test_windows.py -> build/lib.linux-x86_64-cpython-311/psutil/tests
copying psutil/tests/test_memleaks.py -> build/lib.linux-x86_64-cpython-311/psutil/tests
copying psutil/tests/test_contracts.py -> build/lib.linux-x86_64-cpython-311/psutil/tests
copying psutil/tests/test_unicode.py -> build/lib.linux-x86_64-cpython-311/psutil/tests
copying psutil/tests/test_connections.py -> build/lib.linux-x86_64-cpython-311/psutil/tests
copying psutil/tests/test_osx.py -> build/lib.linux-x86_64-cpython-311/psutil/tests
copying psutil/tests/runner.py -> build/lib.linux-x86_64-cpython-311/psutil/tests
copying psutil/tests/test_testutils.py -> build/lib.linux-x86_64-cpython-311/psutil/tests
copying psutil/tests/test_posix.py -> build/lib.linux-x86_64-cpython-311/psutil/tests
copying psutil/tests/test_linux.py -> build/lib.linux-x86_64-cpython-311/psutil/tests
copying psutil/tests/test_bsd.py -> build/lib.linux-x86_64-cpython-311/psutil/tests
copying psutil/tests/test_misc.py -> build/lib.linux-x86_64-cpython-311/psutil/tests
running build_ext
building 'psutil._psutil_linux' extension
creating build/temp.linux-x86_64-cpython-311
creating build/temp.linux-x86_64-cpython-311/psutil
gcc -pthread -B /srv/conda/envs/egi/compiler_compat -DNDEBUG -fwrapv -O2 -Wall -fPIC -O2 -isystem /srv/conda/envs/egi/include -fPIC -O2 -isystem /srv/conda/envs/egi/include -fPIC -DPSUTIL_POSIX=1 -DPSUTIL_SIZEOF_PID_T=4 -DPSUTIL_VERSION=593 -DPSUTIL_LINUX=1 -DPSUTIL_ETHTOOL_MISSING_TYPES=1 -I/srv/conda/envs/egi/include/python3.11 -c psutil/_psutil_common.c -o build/temp.linux-x86_64-cpython-311/psutil/_psutil_common.o
C compiler or Python headers are not installed on this system. Try to run:
sudo apt-get install gcc python3-dev
error: command 'gcc' failed: No such file or directory
[end of output]

note: This error originates from a subprocess, and is likely not a problem with pip.
ERROR: Failed building wheel for psutil
Building wheel for netifaces (setup.py) ... error
error: subprocess-exited-with-error

× python setup.py bdist_wheel did not run successfully.
│ exit code: 1
╰─> [17 lines of output]
/srv/conda/envs/egi/lib/python3.11/site-packages/setuptools/config/setupcfg.py:508: SetuptoolsDeprecationWarning: The license_file parameter is deprecated, use license_files instead.
warnings.warn(msg, warning_class)
running bdist_wheel
running build
running build_ext
checking for getifaddrs...not found.
checking for getnameinfo...not found.
checking for socket IOCTLs...not found.
checking for optional header files...none found.
checking whether struct sockaddr has a length field...no.
checking which sockaddr_xxx structs are defined...none!
checking for routing socket support...no.
checking for sysctl(CTL_NET...) support...no.
checking for netlink support...no.
building 'netifaces' extension
gcc -pthread -B /srv/conda/envs/egi/compiler_compat -DNDEBUG -fwrapv -O2 -Wall -fPIC -O2 -isystem /srv/conda/envs/egi/include -fPIC -O2 -isystem /srv/conda/envs/egi/include -fPIC -DNETIFACES_VERSION=0.11.0 -I/srv/conda/envs/egi/include/python3.11 -c netifaces.c -o build/temp.linux-x86_64-cpython-311/netifaces.o
error: command 'gcc' failed: No such file or directory
[end of output]

note: This error originates from a subprocess, and is likely not a problem with pip.
ERROR: Failed building wheel for netifaces
Running setup.py clean for netifaces
Failed to build psutil netifaces
ERROR: Could not build wheels for psutil, which is required to install pyproject.toml-based projects

Thanks for an amazing tutorial with so many great resources! I was wondering what would be the recommendation on authentication for github and maybe in general workflow if we are using the egi notebook (jupyter hub?) during the course?

When I do the following step "To access the Pangeo EOSC JupyterHub, you need to click on this link to open a Jupyterlab on the correct folder for the tutorial." I get the error message "403 : Forbidden" when signing in with the EGI account on JupyterHub

Hi,

I have tried to sign up for an EGI account to get access to the jupyter notebooks for the escience course. I followed the instructions at https://pangeo-data.github.io/escience-2022/before/setup.html, and got emails saying that my requests to join have been approved.
However, for some reason, when trying to access the jupyter notebook through the link on the setup page, I get redirected to a webpage that gives me an issue 403: forbidden.
How can I fix this?
-Mateusz