The script will check for the following prerequisites.
- wget
- tar
- docker
- pgrep
- gzip
- bgzip
At least 30GB of disk space are required.
The script can be used without root rights. I would highly recommend this!
sudo usermod -a -G docker $(whoami)
git clone https://github.com/overathm/vep
chmod +x Run_VEP_batch.sh
./Run_VEP_batch.sh
After the initial setup the script will be executed hourly through the cron facilities.
mo